Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL27156.1 | CEL27158.1 | SRM1_00481 | SRM1_00483 | Hypothetical protein. | acyl-CoA thioesterase YbgC. | 0.955 |
CEL27156.1 | CEL27160.1 | SRM1_00481 | SRM1_00485 | Hypothetical protein. | Lipid A biosynthesis lauroyl acyltransferase. | 0.965 |
CEL27156.1 | CEL27161.1 | SRM1_00481 | SRM1_00486 | Hypothetical protein. | Undecaprenyl-phosphate mannosyltransferase. | 0.956 |
CEL27156.1 | CEL27163.1 | SRM1_00481 | SRM1_00488 | Hypothetical protein. | Hypothetical protein. | 0.954 |
CEL27156.1 | CEL27166.1 | SRM1_00481 | SRM1_00491 | Hypothetical protein. | 2-acyl-glycerophospho-ethanolamine acyltransferase. | 0.954 |
CEL27156.1 | CEL27167.1 | SRM1_00481 | SRM1_00492 | Hypothetical protein. | Hypothetical protein. | 0.954 |
CEL27156.1 | acpP_1 | SRM1_00481 | SRM1_00489 | Hypothetical protein. | Acyl carrier protein. | 0.956 |
CEL27156.1 | acpP_2 | SRM1_00481 | SRM1_00490 | Hypothetical protein. | Acyl carrier protein. | 0.958 |
CEL27156.1 | lolA_1 | SRM1_00481 | SRM1_00482 | Hypothetical protein. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.960 |
CEL27156.1 | srfAC | SRM1_00481 | SRM1_00487 | Hypothetical protein. | Surfactin synthase subunit 3. | 0.962 |
CEL27158.1 | CEL27156.1 | SRM1_00483 | SRM1_00481 | acyl-CoA thioesterase YbgC. | Hypothetical protein. | 0.955 |
CEL27158.1 | CEL27160.1 | SRM1_00483 | SRM1_00485 | acyl-CoA thioesterase YbgC. | Lipid A biosynthesis lauroyl acyltransferase. | 0.954 |
CEL27158.1 | CEL27161.1 | SRM1_00483 | SRM1_00486 | acyl-CoA thioesterase YbgC. | Undecaprenyl-phosphate mannosyltransferase. | 0.954 |
CEL27158.1 | CEL27163.1 | SRM1_00483 | SRM1_00488 | acyl-CoA thioesterase YbgC. | Hypothetical protein. | 0.954 |
CEL27158.1 | CEL27166.1 | SRM1_00483 | SRM1_00491 | acyl-CoA thioesterase YbgC. | 2-acyl-glycerophospho-ethanolamine acyltransferase. | 0.954 |
CEL27158.1 | CEL27167.1 | SRM1_00483 | SRM1_00492 | acyl-CoA thioesterase YbgC. | Hypothetical protein. | 0.955 |
CEL27158.1 | acpP_1 | SRM1_00483 | SRM1_00489 | acyl-CoA thioesterase YbgC. | Acyl carrier protein. | 0.976 |
CEL27158.1 | acpP_2 | SRM1_00483 | SRM1_00490 | acyl-CoA thioesterase YbgC. | Acyl carrier protein. | 0.972 |
CEL27158.1 | lolA_1 | SRM1_00483 | SRM1_00482 | acyl-CoA thioesterase YbgC. | Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.955 |
CEL27158.1 | srfAC | SRM1_00483 | SRM1_00487 | acyl-CoA thioesterase YbgC. | Surfactin synthase subunit 3. | 0.960 |
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