Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL27203.1 | epsJ | SRM1_00528 | SRM1_00527 | Hypothetical protein. | Putative glycosyltransferase EpsJ. | 0.572 |
CEL27203.1 | novN | SRM1_00528 | SRM1_00526 | Hypothetical protein. | Decarbamoylnovobiocin carbamoyltransferase. | 0.584 |
CEL32158.1 | CEL32159.1 | SRM1_05532 | SRM1_05533 | SdiA-regulated. | SdiA-regulated. | 0.601 |
CEL32158.1 | kdkA | SRM1_05532 | SRM1_00525 | SdiA-regulated. | 3-deoxy-D-manno-octulosonic acid kinase. | 0.759 |
CEL32158.1 | ltaS1_3 | SRM1_05532 | SRM1_04054 | SdiA-regulated. | Lipoteichoic acid synthase 1. | 0.742 |
CEL32158.1 | novN | SRM1_05532 | SRM1_00526 | SdiA-regulated. | Decarbamoylnovobiocin carbamoyltransferase. | 0.619 |
CEL32158.1 | rfaG | SRM1_05532 | SRM1_00521 | SdiA-regulated. | Lipopolysaccharide core biosynthesis protein RfaG. | 0.725 |
CEL32158.1 | rfaP_1 | SRM1_05532 | SRM1_00522 | SdiA-regulated. | Lipopolysaccharide core heptose(I) kinase RfaP. | 0.763 |
CEL32159.1 | CEL32158.1 | SRM1_05533 | SRM1_05532 | SdiA-regulated. | SdiA-regulated. | 0.601 |
CEL32159.1 | kdkA | SRM1_05533 | SRM1_00525 | SdiA-regulated. | 3-deoxy-D-manno-octulosonic acid kinase. | 0.772 |
CEL32159.1 | ltaS1_3 | SRM1_05533 | SRM1_04054 | SdiA-regulated. | Lipoteichoic acid synthase 1. | 0.758 |
CEL32159.1 | novN | SRM1_05533 | SRM1_00526 | SdiA-regulated. | Decarbamoylnovobiocin carbamoyltransferase. | 0.649 |
CEL32159.1 | rfaG | SRM1_05533 | SRM1_00521 | SdiA-regulated. | Lipopolysaccharide core biosynthesis protein RfaG. | 0.751 |
CEL32159.1 | rfaP_1 | SRM1_05533 | SRM1_00522 | SdiA-regulated. | Lipopolysaccharide core heptose(I) kinase RfaP. | 0.770 |
epsJ | CEL27203.1 | SRM1_00527 | SRM1_00528 | Putative glycosyltransferase EpsJ. | Hypothetical protein. | 0.572 |
epsJ | kdkA | SRM1_00527 | SRM1_00525 | Putative glycosyltransferase EpsJ. | 3-deoxy-D-manno-octulosonic acid kinase. | 0.437 |
epsJ | novN | SRM1_00527 | SRM1_00526 | Putative glycosyltransferase EpsJ. | Decarbamoylnovobiocin carbamoyltransferase. | 0.805 |
epsJ | rfaC | SRM1_00527 | SRM1_00520 | Putative glycosyltransferase EpsJ. | Lipopolysaccharide heptosyltransferase 1. | 0.631 |
epsJ | rfaF | SRM1_00527 | SRM1_00519 | Putative glycosyltransferase EpsJ. | ADP-heptose--LPS heptosyltransferase 2. | 0.638 |
epsJ | rfaG | SRM1_00527 | SRM1_00521 | Putative glycosyltransferase EpsJ. | Lipopolysaccharide core biosynthesis protein RfaG. | 0.558 |
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