Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
puuB_1Gamma-glutamylputrescine oxidoreductase. (427 aa)    
Predicted Functional Partners:
comC
(2R)-3-sulfolactate dehydrogenase (NADP(+)); Belongs to the LDH2/MDH2 oxidoreductase family.
    
 0.968
gabD
Succinate-semialdehyde dehydrogenase [NADP(+)]; Belongs to the aldehyde dehydrogenase family.
 
 
 0.957
gcvT_2
Aminomethyltransferase; Belongs to the GcvT family.
  
 0.864
livJ
Leu/Ile/Val/Thr-binding protein precursor.
  
    0.798
gltB
Glutamate synthase [NADPH] large chain precursor.
  
 
 0.771
puuA_2
Gamma-glutamylputrescine synthetase PuuA; Belongs to the glutamine synthetase family.
 
 
 0.668
gcvA_4
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
 
     0.658
puuA_3
Gamma-glutamylputrescine synthetase PuuA.
 
 
 0.632
soxD
Sarcosine oxidase, delta subunit family.
  
 0.632
puuA_5
Gamma-glutamylputrescine synthetase PuuA; Belongs to the glutamine synthetase family.
 
 
 0.627
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
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