Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL26782.1 | bfr_1 | SRM1_00103 | SRM1_00632 | Hypothetical protein. | Bacterioferritin. | 0.712 |
| CEL26782.1 | csbD | SRM1_00103 | SRM1_04287 | Hypothetical protein. | Stress response protein CsbD. | 0.862 |
| CEL26782.1 | ygdR | SRM1_00103 | SRM1_03862 | Hypothetical protein. | Putative lipoprotein YgdR precursor. | 0.723 |
| CEL31231.1 | bfr_1 | SRM1_04595 | SRM1_00632 | Hypothetical protein. | Bacterioferritin. | 0.447 |
| bfd | bfr_1 | SRM1_04457 | SRM1_00632 | Bacterioferritin-associated ferredoxin. | Bacterioferritin. | 0.813 |
| bfd | bfr_2 | SRM1_04457 | SRM1_04458 | Bacterioferritin-associated ferredoxin. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.954 |
| bfr_1 | CEL26782.1 | SRM1_00632 | SRM1_00103 | Bacterioferritin. | Hypothetical protein. | 0.712 |
| bfr_1 | CEL31231.1 | SRM1_00632 | SRM1_04595 | Bacterioferritin. | Hypothetical protein. | 0.447 |
| bfr_1 | bfd | SRM1_00632 | SRM1_04457 | Bacterioferritin. | Bacterioferritin-associated ferredoxin. | 0.813 |
| bfr_1 | bfr_2 | SRM1_00632 | SRM1_04458 | Bacterioferritin. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.517 |
| bfr_1 | csbD | SRM1_00632 | SRM1_04287 | Bacterioferritin. | Stress response protein CsbD. | 0.667 |
| bfr_1 | gcvA_5 | SRM1_00632 | SRM1_00633 | Bacterioferritin. | Glycine cleavage system transcriptional activator. | 0.540 |
| bfr_1 | rpfC_1 | SRM1_00632 | SRM1_02802 | Bacterioferritin. | Sensory/regulatory protein RpfC. | 0.646 |
| bfr_1 | rsbRA | SRM1_00632 | SRM1_02966 | Bacterioferritin. | RsbT co-antagonist protein RsbRA. | 0.471 |
| bfr_1 | rsbT_2 | SRM1_00632 | SRM1_02969 | Bacterioferritin. | Serine/threonine-protein kinase RsbT. | 0.438 |
| bfr_1 | ygdR | SRM1_00632 | SRM1_03862 | Bacterioferritin. | Putative lipoprotein YgdR precursor. | 0.650 |
| bfr_2 | bfd | SRM1_04458 | SRM1_04457 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Bacterioferritin-associated ferredoxin. | 0.954 |
| bfr_2 | bfr_1 | SRM1_04458 | SRM1_00632 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Bacterioferritin. | 0.517 |
| bfr_2 | rpfC_1 | SRM1_04458 | SRM1_02802 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Sensory/regulatory protein RpfC. | 0.646 |
| bfr_2 | rsbRA | SRM1_04458 | SRM1_02966 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | RsbT co-antagonist protein RsbRA. | 0.402 |
page 1 of 2