| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| bamE | fur | SRM1_00805 | SRM1_00806 | Outer membrane protein assembly factor BamE precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.687 |
| birA | fur | SRM1_05200 | SRM1_00806 | Bifunctional ligase/repressor BirA. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.553 |
| birA | hfq | SRM1_05200 | SRM1_00582 | Bifunctional ligase/repressor BirA. | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.426 |
| birA | rpoA | SRM1_05200 | SRM1_05155 | Bifunctional ligase/repressor BirA. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.596 |
| fur | bamE | SRM1_00806 | SRM1_00805 | Ferric uptake regulation protein; Belongs to the Fur family. | Outer membrane protein assembly factor BamE precursor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.687 |
| fur | birA | SRM1_00806 | SRM1_05200 | Ferric uptake regulation protein; Belongs to the Fur family. | Bifunctional ligase/repressor BirA. | 0.553 |
| fur | hfq | SRM1_00806 | SRM1_00582 | Ferric uptake regulation protein; Belongs to the Fur family. | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.589 |
| fur | rnt_1 | SRM1_00806 | SRM1_00001 | Ferric uptake regulation protein; Belongs to the Fur family. | Ribonuclease T. | 0.737 |
| fur | rpoA | SRM1_00806 | SRM1_05155 | Ferric uptake regulation protein; Belongs to the Fur family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.688 |
| fur | rpoD | SRM1_00806 | SRM1_05252 | Ferric uptake regulation protein; Belongs to the Fur family. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.579 |
| fur | rpoZ | SRM1_00806 | SRM1_05690 | Ferric uptake regulation protein; Belongs to the Fur family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.554 |
| fur | secA | SRM1_00806 | SRM1_04364 | Ferric uptake regulation protein; Belongs to the Fur family. | Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.735 |
| fur | trxA_1 | SRM1_00806 | SRM1_02935 | Ferric uptake regulation protein; Belongs to the Fur family. | Thioredoxin. | 0.573 |
| fur | trxA_3 | SRM1_00806 | SRM1_05598 | Ferric uptake regulation protein; Belongs to the Fur family. | Thioredoxin-1; Belongs to the thioredoxin family. | 0.651 |
| hfq | birA | SRM1_00582 | SRM1_05200 | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Bifunctional ligase/repressor BirA. | 0.426 |
| hfq | fur | SRM1_00582 | SRM1_00806 | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.589 |
| hfq | rpoA | SRM1_00582 | SRM1_05155 | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.503 |
| hfq | rpoD | SRM1_00582 | SRM1_05252 | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.474 |
| hfq | trxA_1 | SRM1_00582 | SRM1_02935 | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Thioredoxin. | 0.537 |
| hfq | trxA_3 | SRM1_00582 | SRM1_05598 | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Thioredoxin-1; Belongs to the thioredoxin family. | 0.460 |