Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mlaFPutative phospholipid import ATP-binding protein MlaF. (269 aa)    
Predicted Functional Partners:
mlaE_2
Putative phospholipid ABC transporter permease protein MlaE.
 0.999
mlaD
Putative phospholipid ABC transporter-binding protein MlaD.
 
 0.999
CEL27584.1
Hypothetical protein.
  
 0.998
mlaE_1
Putative phospholipid ABC transporter permease protein MlaE.
 
 0.997
mlaC
Putative phospholipid-binding protein MlaC precursor.
  
 
 0.996
CEL26777.1
Mce related protein.
 
 0.988
CEL26776.1
Putative ABC transporter ATP-binding protein.
  
  
 
0.959
CEL28082.1
Putative multidrug export ATP-binding/permease protein.
    
0.769
CEL28195.1
STAS domain protein.
   
 0.744
rsbRA
RsbT co-antagonist protein RsbRA.
   
 0.744
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
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