Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gltC_1HTH-type transcriptional regulator GltC. (295 aa)    
Predicted Functional Partners:
cidA_1
Holin-like protein CidA.
 
     0.849
cmpR_9
HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family.
  
     0.758
gcvA_12
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.734
yohK_1
Inner membrane protein YohK.
 
     0.728
gcvA_7
Glycine cleavage system transcriptional activator.
  
     0.727
gcvA_1
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.723
oxyR_1
Hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
  
     0.719
gcvA_9
Glycine cleavage system transcriptional activator.
  
     0.713
gcvA_4
Glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.682
dmlR_2
HTH-type transcriptional regulator DmlR; Belongs to the LysR transcriptional regulatory family.
  
     0.661
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
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