Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL27626.1 | hmgA | SRM1_00956 | SRM1_00955 | Ureidoglycolate lyase. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.994 |
| CEL27626.1 | hpd_1 | SRM1_00956 | SRM1_02856 | Ureidoglycolate lyase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.853 |
| CEL27626.1 | nagL_1 | SRM1_00956 | SRM1_00957 | Ureidoglycolate lyase. | Maleylpyruvate isomerase. | 0.981 |
| CEL27626.1 | phhA | SRM1_00956 | SRM1_01489 | Ureidoglycolate lyase. | Phenylalanine-4-hydroxylase. | 0.712 |
| hmgA | CEL27626.1 | SRM1_00955 | SRM1_00956 | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | Ureidoglycolate lyase. | 0.994 |
| hmgA | hpd_1 | SRM1_00955 | SRM1_02856 | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 4-hydroxyphenylpyruvate dioxygenase. | 0.969 |
| hmgA | nagL_1 | SRM1_00955 | SRM1_00957 | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | Maleylpyruvate isomerase. | 0.974 |
| hmgA | phhA | SRM1_00955 | SRM1_01489 | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | Phenylalanine-4-hydroxylase. | 0.912 |
| hpd_1 | CEL27626.1 | SRM1_02856 | SRM1_00956 | 4-hydroxyphenylpyruvate dioxygenase. | Ureidoglycolate lyase. | 0.853 |
| hpd_1 | hmgA | SRM1_02856 | SRM1_00955 | 4-hydroxyphenylpyruvate dioxygenase. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.969 |
| hpd_1 | nagL_1 | SRM1_02856 | SRM1_00957 | 4-hydroxyphenylpyruvate dioxygenase. | Maleylpyruvate isomerase. | 0.892 |
| hpd_1 | phhA | SRM1_02856 | SRM1_01489 | 4-hydroxyphenylpyruvate dioxygenase. | Phenylalanine-4-hydroxylase. | 0.903 |
| nagL_1 | CEL27626.1 | SRM1_00957 | SRM1_00956 | Maleylpyruvate isomerase. | Ureidoglycolate lyase. | 0.981 |
| nagL_1 | hmgA | SRM1_00957 | SRM1_00955 | Maleylpyruvate isomerase. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.974 |
| nagL_1 | hpd_1 | SRM1_00957 | SRM1_02856 | Maleylpyruvate isomerase. | 4-hydroxyphenylpyruvate dioxygenase. | 0.892 |
| nagL_1 | phhA | SRM1_00957 | SRM1_01489 | Maleylpyruvate isomerase. | Phenylalanine-4-hydroxylase. | 0.812 |
| nagL_1 | rpoA | SRM1_00957 | SRM1_05155 | Maleylpyruvate isomerase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.846 |
| nagL_1 | rpoB | SRM1_00957 | SRM1_05186 | Maleylpyruvate isomerase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.734 |
| nagL_1 | rpoC | SRM1_00957 | SRM1_05185 | Maleylpyruvate isomerase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.762 |
| nagL_1 | rpoD | SRM1_00957 | SRM1_05252 | Maleylpyruvate isomerase. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.745 |
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