Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL27641.1 | CEL27644.1 | SRM1_00971 | SRM1_00974 | Hypothetical protein. | Fec operon regulator FecR. | 0.851 |
CEL27641.1 | fecI_2 | SRM1_00971 | SRM1_00969 | Hypothetical protein. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.684 |
CEL27641.1 | fecI_3 | SRM1_00971 | SRM1_00973 | Hypothetical protein. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.833 |
CEL27641.1 | fecI_8 | SRM1_00971 | SRM1_05289 | Hypothetical protein. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.435 |
CEL27644.1 | CEL27641.1 | SRM1_00974 | SRM1_00971 | Fec operon regulator FecR. | Hypothetical protein. | 0.851 |
CEL27644.1 | CEL29663.1 | SRM1_00974 | SRM1_03017 | Fec operon regulator FecR. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.839 |
CEL27644.1 | fecI_1 | SRM1_00974 | SRM1_00179 | Fec operon regulator FecR. | Putative RNA polymerase sigma factor FecI. | 0.838 |
CEL27644.1 | fecI_2 | SRM1_00974 | SRM1_00969 | Fec operon regulator FecR. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.916 |
CEL27644.1 | fecI_3 | SRM1_00974 | SRM1_00973 | Fec operon regulator FecR. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.963 |
CEL27644.1 | fecI_4 | SRM1_00974 | SRM1_01947 | Fec operon regulator FecR. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.838 |
CEL27644.1 | fecI_5 | SRM1_00974 | SRM1_02629 | Fec operon regulator FecR. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.839 |
CEL27644.1 | fecI_6 | SRM1_00974 | SRM1_03712 | Fec operon regulator FecR. | Putative RNA polymerase sigma factor FecI. | 0.838 |
CEL27644.1 | fecI_8 | SRM1_00974 | SRM1_05289 | Fec operon regulator FecR. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.839 |
CEL27644.1 | sigE | SRM1_00974 | SRM1_04313 | Fec operon regulator FecR. | ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.841 |
CEL29663.1 | CEL27644.1 | SRM1_03017 | SRM1_00974 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Fec operon regulator FecR. | 0.839 |
CEL29663.1 | fecI_1 | SRM1_03017 | SRM1_00179 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Putative RNA polymerase sigma factor FecI. | 0.770 |
CEL29663.1 | fecI_2 | SRM1_03017 | SRM1_00969 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
CEL29663.1 | fecI_5 | SRM1_03017 | SRM1_02629 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
CEL29663.1 | fecI_8 | SRM1_03017 | SRM1_05289 | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | Putative RNA polymerase sigma factor FecI; Belongs to the sigma-70 factor family. ECF subfamily. | 0.772 |
fecI_1 | CEL27644.1 | SRM1_00179 | SRM1_00974 | Putative RNA polymerase sigma factor FecI. | Fec operon regulator FecR. | 0.838 |
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