Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dmlR_3HTH-type transcriptional regulator DmlR; Belongs to the LysR transcriptional regulatory family. (322 aa)    
Predicted Functional Partners:
aaeX_2
Protein AaeX.
       0.759
gcvA_8
Glycine cleavage system transcriptional activator.
  
     0.746
ampR_1
HTH-type transcriptional activator AmpR.
  
     0.736
gltR_2
HTH-type transcriptional regulator GltR; Belongs to the LysR transcriptional regulatory family.
  
     0.726
mdtP_1
Multidrug resistance outer membrane protein MdtP precursor.
 
  
 0.725
cmpR_1
HTH-type transcriptional activator CmpR; Belongs to the LysR transcriptional regulatory family.
  
     0.692
cynR_5
HTH-type transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
  
     0.664
gbpR
HTH-type transcriptional regulator GbpR; Belongs to the LysR transcriptional regulatory family.
  
     0.662
benM_3
HTH-type transcriptional regulator BenM.
  
     0.645
cynR_1
HTH-type transcriptional regulator CynR.
  
     0.634
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
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