| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL27759.1 | recJ | SRM1_01089 | SRM1_01090 | YaeQ protein. | Single-stranded-DNA-specific exonuclease RecJ. | 0.687 |
| CEL30767.1 | mfd | SRM1_04126 | SRM1_03777 | ComEC family competence protein. | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.505 |
| CEL30767.1 | recJ | SRM1_04126 | SRM1_01090 | ComEC family competence protein. | Single-stranded-DNA-specific exonuclease RecJ. | 0.623 |
| CEL30767.1 | recQ_1 | SRM1_04126 | SRM1_00325 | ComEC family competence protein. | ATP-dependent DNA helicase RecQ. | 0.436 |
| CEL30767.1 | ssb | SRM1_04126 | SRM1_05149 | ComEC family competence protein. | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.604 |
| mfd | CEL30767.1 | SRM1_03777 | SRM1_04126 | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | ComEC family competence protein. | 0.505 |
| mfd | mutS | SRM1_03777 | SRM1_01162 | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.549 |
| mfd | recJ | SRM1_03777 | SRM1_01090 | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Single-stranded-DNA-specific exonuclease RecJ. | 0.592 |
| mutS | mfd | SRM1_01162 | SRM1_03777 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.549 |
| mutS | priA | SRM1_01162 | SRM1_00451 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.571 |
| mutS | recJ | SRM1_01162 | SRM1_01090 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | Single-stranded-DNA-specific exonuclease RecJ. | 0.625 |
| mutS | recQ_1 | SRM1_01162 | SRM1_00325 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | ATP-dependent DNA helicase RecQ. | 0.706 |
| mutS | topA | SRM1_01162 | SRM1_03787 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.709 |
| priA | mutS | SRM1_00451 | SRM1_01162 | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.571 |
| priA | recJ | SRM1_00451 | SRM1_01090 | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | Single-stranded-DNA-specific exonuclease RecJ. | 0.641 |
| priA | ssb | SRM1_00451 | SRM1_05149 | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. | 0.912 |
| recJ | CEL27759.1 | SRM1_01090 | SRM1_01089 | Single-stranded-DNA-specific exonuclease RecJ. | YaeQ protein. | 0.687 |
| recJ | CEL30767.1 | SRM1_01090 | SRM1_04126 | Single-stranded-DNA-specific exonuclease RecJ. | ComEC family competence protein. | 0.623 |
| recJ | mfd | SRM1_01090 | SRM1_03777 | Single-stranded-DNA-specific exonuclease RecJ. | Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.592 |
| recJ | mutS | SRM1_01090 | SRM1_01162 | Single-stranded-DNA-specific exonuclease RecJ. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.625 |