Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL28013.1 | CEL28192.1 | SRM1_01346 | SRM1_01526 | HDOD domain protein. | Flagellar assembly protein H. | 0.693 |
CEL28013.1 | CEL28199.1 | SRM1_01346 | SRM1_01533 | HDOD domain protein. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.754 |
CEL28013.1 | CEL28227.1 | SRM1_01346 | SRM1_01561 | HDOD domain protein. | Chemotaxis regulator CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.688 |
CEL28013.1 | CEL30841.1 | SRM1_01346 | SRM1_04200 | HDOD domain protein. | Flagellar basal body P-ring biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | 0.745 |
CEL28013.1 | CEL32215.1 | SRM1_01346 | SRM1_05589 | HDOD domain protein. | Flagellar basal body-associated protein FliL-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.748 |
CEL28013.1 | cheV_2 | SRM1_01346 | SRM1_04199 | HDOD domain protein. | Chemotaxis protein CheV. | 0.732 |
CEL28013.1 | flgH | SRM1_01346 | SRM1_01493 | HDOD domain protein. | Flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.728 |
CEL28013.1 | fliM | SRM1_01346 | SRM1_01534 | HDOD domain protein. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.730 |
CEL28013.1 | ygfZ | SRM1_01346 | SRM1_01347 | HDOD domain protein. | tRNA-modifying protein YgfZ; Belongs to the GcvT family. | 0.709 |
CEL28013.1 | ylxH | SRM1_01346 | SRM1_01558 | HDOD domain protein. | Flagellum site-determining protein YlxH. | 0.742 |
CEL28192.1 | CEL28013.1 | SRM1_01526 | SRM1_01346 | Flagellar assembly protein H. | HDOD domain protein. | 0.693 |
CEL28192.1 | CEL28199.1 | SRM1_01526 | SRM1_01533 | Flagellar assembly protein H. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.958 |
CEL28192.1 | CEL28227.1 | SRM1_01526 | SRM1_01561 | Flagellar assembly protein H. | Chemotaxis regulator CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.860 |
CEL28192.1 | CEL30841.1 | SRM1_01526 | SRM1_04200 | Flagellar assembly protein H. | Flagellar basal body P-ring biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family. | 0.954 |
CEL28192.1 | CEL32215.1 | SRM1_01526 | SRM1_05589 | Flagellar assembly protein H. | Flagellar basal body-associated protein FliL-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.943 |
CEL28192.1 | cheV_2 | SRM1_01526 | SRM1_04199 | Flagellar assembly protein H. | Chemotaxis protein CheV. | 0.826 |
CEL28192.1 | flgH | SRM1_01526 | SRM1_01493 | Flagellar assembly protein H. | Flagellar L-ring protein precursor; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.967 |
CEL28192.1 | fliM | SRM1_01526 | SRM1_01534 | Flagellar assembly protein H. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.985 |
CEL28192.1 | ylxH | SRM1_01526 | SRM1_01558 | Flagellar assembly protein H. | Flagellum site-determining protein YlxH. | 0.670 |
CEL28199.1 | CEL28013.1 | SRM1_01533 | SRM1_01346 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | HDOD domain protein. | 0.754 |
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