Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
catD_33-oxoadipate enol-lactonase 2. (267 aa)    
Predicted Functional Partners:
pcaC-2
Carboxymuconolactone decarboxylase family protein.
 
 
 0.996
pcaC
Carboxymuconolactone decarboxylase family protein.
 
 
 0.994
CEL29704.1
Carboxymuconolactone decarboxylase family protein.
 
 
 0.990
catD_2
3-oxoadipate enol-lactonase 2.
  
  
 
0.966
ppiA
Peptidyl-prolyl cis-trans isomerase A precursor; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
   0.913
allS_2
HTH-type transcriptional activator AllS; Belongs to the LysR transcriptional regulatory family.
  
  
 0.822
lgrD
Linear gramicidin synthase subunit D.
  
 0.773
CEL28082.1
Putative multidrug export ATP-binding/permease protein.
  
 
 0.761
catD_5
3-oxoadipate enol-lactonase 2.
  
  
 
0.722
hsaB_1
Flavin-dependent monooxygenase, reductase subunit HsaB.
  
    0.707
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
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