Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
occP_2Octopine permease ATP-binding protein P. (265 aa)    
Predicted Functional Partners:
yecS_1
Inner membrane amino-acid ABC transporter permease protein YecS.
 0.991
artQ_2
Arginine transport system permease protein ArtQ.
 0.987
yecS_2
Inner membrane amino-acid ABC transporter permease protein YecS.
 
 0.974
glnP_2
Glutamine transport system permease protein GlnP.
 0.934
yecS_3
Inner membrane amino-acid ABC transporter permease protein YecS.
 
 0.929
glnH_1
Glutamine-binding periplasmic protein precursor.
 
 0.928
artQ_4
Arginine transport system permease protein ArtQ.
 0.915
artQ_3
Arginine transport system permease protein ArtQ.
 0.913
gltK
Glutamate/aspartate transport system permease protein GltK.
 0.910
glnP_1
Glutamine transport system permease protein GlnP.
 0.896
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
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