Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL28465.1 | aroC | SRM1_01803 | SRM1_01804 | Alpha/beta hydrolase family protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.592 |
| CEL28465.1 | hcaT | SRM1_01803 | SRM1_01805 | Alpha/beta hydrolase family protein. | Putative 3-phenylpropionic acid transporter. | 0.550 |
| CEL28465.1 | mtnB | SRM1_01803 | SRM1_01806 | Alpha/beta hydrolase family protein. | Methylthioribulose-1-phosphate dehydratase. | 0.507 |
| CEL28465.1 | mtnC | SRM1_01803 | SRM1_01808 | Alpha/beta hydrolase family protein. | Enolase-phosphatase E1. | 0.405 |
| CEL28465.1 | mtnD | SRM1_01803 | SRM1_01807 | Alpha/beta hydrolase family protein. | Acireductone dioxygenase. | 0.553 |
| CEL31129.1 | aroC | SRM1_04493 | SRM1_01804 | Decaprenyl-phosphate phosphoribosyltransferase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.500 |
| CEL31129.1 | cysG | SRM1_04493 | SRM1_03423 | Decaprenyl-phosphate phosphoribosyltransferase. | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. | 0.447 |
| CEL31129.1 | hcaT | SRM1_04493 | SRM1_01805 | Decaprenyl-phosphate phosphoribosyltransferase. | Putative 3-phenylpropionic acid transporter. | 0.469 |
| CEL31425.1 | hcaT | SRM1_04790 | SRM1_01805 | Hypothetical protein. | Putative 3-phenylpropionic acid transporter. | 0.508 |
| aroC | CEL28465.1 | SRM1_01804 | SRM1_01803 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Alpha/beta hydrolase family protein. | 0.592 |
| aroC | CEL31129.1 | SRM1_01804 | SRM1_04493 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Decaprenyl-phosphate phosphoribosyltransferase. | 0.500 |
| aroC | hcaT | SRM1_01804 | SRM1_01805 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Putative 3-phenylpropionic acid transporter. | 0.723 |
| aroC | mtnB | SRM1_01804 | SRM1_01806 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Methylthioribulose-1-phosphate dehydratase. | 0.725 |
| aroC | mtnC | SRM1_01804 | SRM1_01808 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Enolase-phosphatase E1. | 0.543 |
| aroC | mtnD | SRM1_01804 | SRM1_01807 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Acireductone dioxygenase. | 0.541 |
| cysG | CEL31129.1 | SRM1_03423 | SRM1_04493 | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. | Decaprenyl-phosphate phosphoribosyltransferase. | 0.447 |
| cysG | hcaT | SRM1_03423 | SRM1_01805 | Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. | Putative 3-phenylpropionic acid transporter. | 0.588 |
| hcaT | CEL28465.1 | SRM1_01805 | SRM1_01803 | Putative 3-phenylpropionic acid transporter. | Alpha/beta hydrolase family protein. | 0.550 |
| hcaT | CEL31129.1 | SRM1_01805 | SRM1_04493 | Putative 3-phenylpropionic acid transporter. | Decaprenyl-phosphate phosphoribosyltransferase. | 0.469 |
| hcaT | CEL31425.1 | SRM1_01805 | SRM1_04790 | Putative 3-phenylpropionic acid transporter. | Hypothetical protein. | 0.508 |
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