STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccoP1Cbb3-type cytochrome c oxidase subunit CcoP1; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (316 aa)    
Predicted Functional Partners:
CEL28580.1
Cytochrome C oxidase, mono-heme subunit/FixO.
 
 
 0.999
CEL28581.1
Hypothetical protein; Cytochrome c oxidase subunit 1 homolog, bacteroid; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.999
CEL28576.1
Cytochrome C oxidase, mono-heme subunit/FixO.
 
 
 0.998
CEL28577.1
Hypothetical protein; Cytochrome c oxidase subunit 1 homolog, bacteroid; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.996
CEL29079.1
Hypothetical protein; Cytochrome c oxidase subunit 1 homolog, bacteroid; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.996
petB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.944
CEL28579.1
Cbb3-type cytochrome oxidase component FixQ.
  
 
 0.940
CEL28573.1
Ubp3 associated protein Bre5.
  
 0.920
CEL29093.1
Quinol dehydrogenase membrane component.
  
 0.919
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.912
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.