Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL28694.1 | CEL28695.1 | SRM1_02041 | SRM1_02042 | Phage terminase, small subunit. | Phage Terminase. | 0.965 |
CEL28694.1 | CEL28697.1 | SRM1_02041 | SRM1_02044 | Phage terminase, small subunit. | Phage portal protein. | 0.969 |
CEL28694.1 | CEL28699.1 | SRM1_02041 | SRM1_02046 | Phage terminase, small subunit. | Phage capsid family protein. | 0.861 |
CEL28694.1 | CEL28700.1 | SRM1_02041 | SRM1_02047 | Phage terminase, small subunit. | Hypothetical protein. | 0.607 |
CEL28694.1 | CEL28701.1 | SRM1_02041 | SRM1_02048 | Phage terminase, small subunit. | Hypothetical protein. | 0.663 |
CEL28694.1 | CEL28702.1 | SRM1_02041 | SRM1_02049 | Phage terminase, small subunit. | Phage head-tail joining protein. | 0.663 |
CEL28694.1 | CEL28703.1 | SRM1_02041 | SRM1_02050 | Phage terminase, small subunit. | Hypothetical protein. | 0.634 |
CEL28694.1 | CEL28704.1 | SRM1_02041 | SRM1_02051 | Phage terminase, small subunit. | Hypothetical protein. | 0.604 |
CEL28694.1 | CEL28705.1 | SRM1_02041 | SRM1_02052 | Phage terminase, small subunit. | Hypothetical protein. | 0.573 |
CEL28694.1 | CEL28706.1 | SRM1_02041 | SRM1_02053 | Phage terminase, small subunit. | Phage tail sheath protein. | 0.589 |
CEL28695.1 | CEL28694.1 | SRM1_02042 | SRM1_02041 | Phage Terminase. | Phage terminase, small subunit. | 0.965 |
CEL28695.1 | CEL28697.1 | SRM1_02042 | SRM1_02044 | Phage Terminase. | Phage portal protein. | 0.962 |
CEL28695.1 | CEL28699.1 | SRM1_02042 | SRM1_02046 | Phage Terminase. | Phage capsid family protein. | 0.871 |
CEL28695.1 | CEL28700.1 | SRM1_02042 | SRM1_02047 | Phage Terminase. | Hypothetical protein. | 0.607 |
CEL28695.1 | CEL28701.1 | SRM1_02042 | SRM1_02048 | Phage Terminase. | Hypothetical protein. | 0.663 |
CEL28695.1 | CEL28702.1 | SRM1_02042 | SRM1_02049 | Phage Terminase. | Phage head-tail joining protein. | 0.667 |
CEL28695.1 | CEL28703.1 | SRM1_02042 | SRM1_02050 | Phage Terminase. | Hypothetical protein. | 0.648 |
CEL28695.1 | CEL28704.1 | SRM1_02042 | SRM1_02051 | Phage Terminase. | Hypothetical protein. | 0.592 |
CEL28695.1 | CEL28705.1 | SRM1_02042 | SRM1_02052 | Phage Terminase. | Hypothetical protein. | 0.573 |
CEL28695.1 | CEL28706.1 | SRM1_02042 | SRM1_02053 | Phage Terminase. | Phage tail sheath protein. | 0.590 |
page 1 of 6