Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL26795.1 | CEL29135.1 | SRM1_00116 | SRM1_02484 | Hypothetical protein. | Hypothetical protein. | 0.672 |
CEL29134.1 | CEL29135.1 | SRM1_02483 | SRM1_02484 | Fec operon regulator FecR. | Hypothetical protein. | 0.539 |
CEL29135.1 | CEL26795.1 | SRM1_02484 | SRM1_00116 | Hypothetical protein. | Hypothetical protein. | 0.672 |
CEL29135.1 | CEL29134.1 | SRM1_02484 | SRM1_02483 | Hypothetical protein. | Fec operon regulator FecR. | 0.539 |
CEL29135.1 | ribBA_1 | SRM1_02484 | SRM1_03062 | Hypothetical protein. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.410 |
CEL29135.1 | ribBA_2 | SRM1_02484 | SRM1_05109 | Hypothetical protein. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.410 |
ribBA_1 | CEL29135.1 | SRM1_03062 | SRM1_02484 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | Hypothetical protein. | 0.410 |
ribBA_1 | ribBA_2 | SRM1_03062 | SRM1_05109 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.540 |
ribBA_2 | CEL29135.1 | SRM1_05109 | SRM1_02484 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | Hypothetical protein. | 0.410 |
ribBA_2 | ribBA_1 | SRM1_05109 | SRM1_03062 | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.540 |