Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL28473.1 | pphA | SRM1_01811 | SRM1_02685 | Ankyrin repeats (3 copies). | Serine/threonine-protein phosphatase 1. | 0.468 |
CEL29333.1 | pphA | SRM1_02684 | SRM1_02685 | Hypothetical protein. | Serine/threonine-protein phosphatase 1. | 0.639 |
CEL31267.1 | pphA | SRM1_04631 | SRM1_02685 | Hypothetical protein; C-terminal region of Pasteurella multocida toxin residues 569-1285. | Serine/threonine-protein phosphatase 1. | 0.468 |
CEL31267.1 | toxA | SRM1_04631 | SRM1_04630 | Hypothetical protein; C-terminal region of Pasteurella multocida toxin residues 569-1285. | Dermonecrotic toxin. | 0.465 |
CEL31568.1 | pphA | SRM1_04937 | SRM1_02685 | Ankyrin repeats (3 copies). | Serine/threonine-protein phosphatase 1. | 0.468 |
CEL32330.1 | pphA | SRM1_05704 | SRM1_02685 | Hypothetical protein. | Serine/threonine-protein phosphatase 1. | 0.468 |
bvgS_3 | pphA | SRM1_03874 | SRM1_02685 | Virulence sensor protein BvgS precursor. | Serine/threonine-protein phosphatase 1. | 0.403 |
bvgS_3 | rpfC_1 | SRM1_03874 | SRM1_02802 | Virulence sensor protein BvgS precursor. | Sensory/regulatory protein RpfC. | 0.994 |
hisC2 | pphA | SRM1_04022 | SRM1_02685 | Histidinol-phosphate aminotransferase 2; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | Serine/threonine-protein phosphatase 1. | 0.437 |
pphA | CEL28473.1 | SRM1_02685 | SRM1_01811 | Serine/threonine-protein phosphatase 1. | Ankyrin repeats (3 copies). | 0.468 |
pphA | CEL29333.1 | SRM1_02685 | SRM1_02684 | Serine/threonine-protein phosphatase 1. | Hypothetical protein. | 0.639 |
pphA | CEL31267.1 | SRM1_02685 | SRM1_04631 | Serine/threonine-protein phosphatase 1. | Hypothetical protein; C-terminal region of Pasteurella multocida toxin residues 569-1285. | 0.468 |
pphA | CEL31568.1 | SRM1_02685 | SRM1_04937 | Serine/threonine-protein phosphatase 1. | Ankyrin repeats (3 copies). | 0.468 |
pphA | CEL32330.1 | SRM1_02685 | SRM1_05704 | Serine/threonine-protein phosphatase 1. | Hypothetical protein. | 0.468 |
pphA | bvgS_3 | SRM1_02685 | SRM1_03874 | Serine/threonine-protein phosphatase 1. | Virulence sensor protein BvgS precursor. | 0.403 |
pphA | hisC2 | SRM1_02685 | SRM1_04022 | Serine/threonine-protein phosphatase 1. | Histidinol-phosphate aminotransferase 2; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.437 |
pphA | rpfC_1 | SRM1_02685 | SRM1_02802 | Serine/threonine-protein phosphatase 1. | Sensory/regulatory protein RpfC. | 0.428 |
pphA | toxA | SRM1_02685 | SRM1_04630 | Serine/threonine-protein phosphatase 1. | Dermonecrotic toxin. | 0.468 |
rpfC_1 | bvgS_3 | SRM1_02802 | SRM1_03874 | Sensory/regulatory protein RpfC. | Virulence sensor protein BvgS precursor. | 0.994 |
rpfC_1 | pphA | SRM1_02802 | SRM1_02685 | Sensory/regulatory protein RpfC. | Serine/threonine-protein phosphatase 1. | 0.428 |
page 1 of 2