Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL27231.1 | CEL29377.1 | SRM1_00556 | SRM1_02728 | Hypothetical protein. | Hypothetical protein. | 0.642 |
CEL27231.1 | CEL30510.1 | SRM1_00556 | SRM1_03869 | Hypothetical protein. | Hypothetical protein. | 0.421 |
CEL27231.1 | pqiA_1 | SRM1_00556 | SRM1_03099 | Hypothetical protein. | Paraquat-inducible protein A. | 0.608 |
CEL27231.1 | pqiA_2 | SRM1_00556 | SRM1_04827 | Hypothetical protein. | Paraquat-inducible protein A. | 0.641 |
CEL27231.1 | pqiA_3 | SRM1_00556 | SRM1_04828 | Hypothetical protein. | Paraquat-inducible protein A. | 0.688 |
CEL27231.1 | pqiB_1 | SRM1_00556 | SRM1_02727 | Hypothetical protein. | Paraquat-inducible protein B. | 0.682 |
CEL27231.1 | pqiB_2 | SRM1_00556 | SRM1_04826 | Hypothetical protein. | Paraquat-inducible protein B. | 0.675 |
CEL27231.1 | yebS | SRM1_00556 | SRM1_03098 | Hypothetical protein. | Inner membrane protein YebS. | 0.608 |
CEL29377.1 | CEL27231.1 | SRM1_02728 | SRM1_00556 | Hypothetical protein. | Hypothetical protein. | 0.642 |
CEL29377.1 | CEL30510.1 | SRM1_02728 | SRM1_03869 | Hypothetical protein. | Hypothetical protein. | 0.466 |
CEL29377.1 | CEL32446.1 | SRM1_02728 | SRM1_05820 | Hypothetical protein. | FtsH protease regulator HflK. | 0.430 |
CEL29377.1 | pqiA_1 | SRM1_02728 | SRM1_03099 | Hypothetical protein. | Paraquat-inducible protein A. | 0.808 |
CEL29377.1 | pqiA_2 | SRM1_02728 | SRM1_04827 | Hypothetical protein. | Paraquat-inducible protein A. | 0.796 |
CEL29377.1 | pqiA_3 | SRM1_02728 | SRM1_04828 | Hypothetical protein. | Paraquat-inducible protein A. | 0.789 |
CEL29377.1 | pqiB_1 | SRM1_02728 | SRM1_02727 | Hypothetical protein. | Paraquat-inducible protein B. | 0.943 |
CEL29377.1 | pqiB_2 | SRM1_02728 | SRM1_04826 | Hypothetical protein. | Paraquat-inducible protein B. | 0.666 |
CEL29377.1 | puuB_5 | SRM1_02728 | SRM1_02726 | Hypothetical protein. | Gamma-glutamylputrescine oxidoreductase. | 0.431 |
CEL29377.1 | yebS | SRM1_02728 | SRM1_03098 | Hypothetical protein. | Inner membrane protein YebS. | 0.809 |
CEL30510.1 | CEL27231.1 | SRM1_03869 | SRM1_00556 | Hypothetical protein. | Hypothetical protein. | 0.421 |
CEL30510.1 | CEL29377.1 | SRM1_03869 | SRM1_02728 | Hypothetical protein. | Hypothetical protein. | 0.466 |
page 1 of 3