ydcR_3 protein (Pseudomonas fluorescens) - STRING interaction network

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ydcR_3

Putative HTH-type transcriptional regulator YdcR. (466 aa)

Predicted Functional Partners:

gabR_2

0.794

gltB

0.721

yjiR_2

0.691

CEL29423.1

0.625

pgm

0.521

pheA

0.497

gcvP_1

0.449

gcvP_2

0.449

Your Current Organism:

Pseudomonas fluorescens

NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEL29423.1	pgm	SRM1_02774	SRM1_02772	Hypothetical protein.	Phosphoglucomutase.	0.519
CEL29423.1	ydcR_3	SRM1_02774	SRM1_02773	Hypothetical protein.	Putative HTH-type transcriptional regulator YdcR.	0.625
gabR_2	gcvP_1	SRM1_05779	SRM1_04328	HTH-type transcriptional regulatory protein GabR.	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	0.449
gabR_2	gcvP_2	SRM1_05779	SRM1_05571	HTH-type transcriptional regulatory protein GabR.	Glycine dehydrogenase (decarboxylating).	0.449
gabR_2	gltB	SRM1_05779	SRM1_00466	HTH-type transcriptional regulatory protein GabR.	Glutamate synthase [NADPH] large chain precursor.	0.721
gabR_2	pheA	SRM1_05779	SRM1_04023	HTH-type transcriptional regulatory protein GabR.	Prephenate dehydratase.	0.497
gabR_2	ydcR_3	SRM1_05779	SRM1_02773	HTH-type transcriptional regulatory protein GabR.	Putative HTH-type transcriptional regulator YdcR.	0.794
gcvP_1	gabR_2	SRM1_04328	SRM1_05779	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	HTH-type transcriptional regulatory protein GabR.	0.449
gcvP_1	gcvP_2	SRM1_04328	SRM1_05571	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	Glycine dehydrogenase (decarboxylating).	0.999
gcvP_1	gltB	SRM1_04328	SRM1_00466	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	Glutamate synthase [NADPH] large chain precursor.	0.985
gcvP_1	ydcR_3	SRM1_04328	SRM1_02773	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	Putative HTH-type transcriptional regulator YdcR.	0.449
gcvP_1	yjiR_2	SRM1_04328	SRM1_03398	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	Putative HTH-type transcriptional regulator YjiR.	0.449
gcvP_2	gabR_2	SRM1_05571	SRM1_05779	Glycine dehydrogenase (decarboxylating).	HTH-type transcriptional regulatory protein GabR.	0.449
gcvP_2	gcvP_1	SRM1_05571	SRM1_04328	Glycine dehydrogenase (decarboxylating).	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	0.999
gcvP_2	gltB	SRM1_05571	SRM1_00466	Glycine dehydrogenase (decarboxylating).	Glutamate synthase [NADPH] large chain precursor.	0.985
gcvP_2	ydcR_3	SRM1_05571	SRM1_02773	Glycine dehydrogenase (decarboxylating).	Putative HTH-type transcriptional regulator YdcR.	0.449
gcvP_2	yjiR_2	SRM1_05571	SRM1_03398	Glycine dehydrogenase (decarboxylating).	Putative HTH-type transcriptional regulator YjiR.	0.449
gltB	gabR_2	SRM1_00466	SRM1_05779	Glutamate synthase [NADPH] large chain precursor.	HTH-type transcriptional regulatory protein GabR.	0.721
gltB	gcvP_1	SRM1_00466	SRM1_04328	Glutamate synthase [NADPH] large chain precursor.	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	0.985
gltB	gcvP_2	SRM1_00466	SRM1_05571	Glutamate synthase [NADPH] large chain precursor.	Glycine dehydrogenase (decarboxylating).	0.985

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