Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL27336.1 | CEL29590.1 | SRM1_00663 | SRM1_02944 | cobalt-precorrin-6A synthase. | Putative cobalt transporter subunit (CbtA). | 0.405 |
CEL27336.1 | CEL29591.1 | SRM1_00663 | SRM1_02945 | cobalt-precorrin-6A synthase. | Cobalamin biosynthesis protein CbiG. | 0.933 |
CEL27336.1 | cobB_1 | SRM1_00663 | SRM1_01639 | cobalt-precorrin-6A synthase. | Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.887 |
CEL27336.1 | cobI | SRM1_00663 | SRM1_00666 | cobalt-precorrin-6A synthase. | Precorrin-2 C(20)-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A. | 0.908 |
CEL27336.1 | cobJ | SRM1_00663 | SRM1_00667 | cobalt-precorrin-6A synthase. | Precorrin-3B C(17)-methyltransferase. | 0.997 |
CEL27336.1 | cobK | SRM1_00663 | SRM1_00662 | cobalt-precorrin-6A synthase. | Precorrin-6A reductase. | 0.988 |
CEL27336.1 | cobL | SRM1_00663 | SRM1_00664 | cobalt-precorrin-6A synthase. | Precorrin-6Y C(5,15)-methyltransferase [decarboxylating]. | 0.998 |
CEL27336.1 | cobM | SRM1_00663 | SRM1_02946 | cobalt-precorrin-6A synthase. | Precorrin-4 C(11)-methyltransferase. | 0.942 |
CEL27336.1 | cobQ | SRM1_00663 | SRM1_01643 | cobalt-precorrin-6A synthase. | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.905 |
CEL29589.1 | CEL29590.1 | SRM1_02943 | SRM1_02944 | Putative cobalt transporter subunit (CbtB). | Putative cobalt transporter subunit (CbtA). | 0.859 |
CEL29589.1 | CEL29591.1 | SRM1_02943 | SRM1_02945 | Putative cobalt transporter subunit (CbtB). | Cobalamin biosynthesis protein CbiG. | 0.786 |
CEL29589.1 | cobM | SRM1_02943 | SRM1_02946 | Putative cobalt transporter subunit (CbtB). | Precorrin-4 C(11)-methyltransferase. | 0.606 |
CEL29590.1 | CEL27336.1 | SRM1_02944 | SRM1_00663 | Putative cobalt transporter subunit (CbtA). | cobalt-precorrin-6A synthase. | 0.405 |
CEL29590.1 | CEL29589.1 | SRM1_02944 | SRM1_02943 | Putative cobalt transporter subunit (CbtA). | Putative cobalt transporter subunit (CbtB). | 0.859 |
CEL29590.1 | CEL29591.1 | SRM1_02944 | SRM1_02945 | Putative cobalt transporter subunit (CbtA). | Cobalamin biosynthesis protein CbiG. | 0.852 |
CEL29590.1 | cobJ | SRM1_02944 | SRM1_00667 | Putative cobalt transporter subunit (CbtA). | Precorrin-3B C(17)-methyltransferase. | 0.478 |
CEL29590.1 | cobL | SRM1_02944 | SRM1_00664 | Putative cobalt transporter subunit (CbtA). | Precorrin-6Y C(5,15)-methyltransferase [decarboxylating]. | 0.483 |
CEL29590.1 | cobM | SRM1_02944 | SRM1_02946 | Putative cobalt transporter subunit (CbtA). | Precorrin-4 C(11)-methyltransferase. | 0.661 |
CEL29591.1 | CEL27336.1 | SRM1_02945 | SRM1_00663 | Cobalamin biosynthesis protein CbiG. | cobalt-precorrin-6A synthase. | 0.933 |
CEL29591.1 | CEL29589.1 | SRM1_02945 | SRM1_02943 | Cobalamin biosynthesis protein CbiG. | Putative cobalt transporter subunit (CbtB). | 0.786 |
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