STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEL29768.1Putative DMT superfamily transporter inner membrane protein. (309 aa)    
Predicted Functional Partners:
CEL29767.1
Anaerobic benzoate catabolism transcriptional regulator.
 
    0.669
CEL29766.1
Hypothetical protein.
       0.584
pucI_1
Putative allantoin permease; Belongs to the purine-cytosine permease (2.A.39) family.
 
    0.515
mrpD
Na(+)/H(+) antiporter subunit D.
       0.492
mrpF
Na(+)/H(+) antiporter subunit F.
       0.487
mrpA
Na(+)/H(+) antiporter subunit A.
       0.485
mnhC1
Na(+)/H(+) antiporter subunit C1.
       0.485
mrpE
Na(+)/H(+) antiporter subunit E.
       0.485
mrpG
Na(+)/H(+) antiporter subunit G.
       0.485
yedA_1
Putative inner membrane transporter YedA.
  
     0.454
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
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