Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL27231.1 | CEL29976.1 | SRM1_00556 | SRM1_03330 | Hypothetical protein. | Hypothetical protein. | 0.426 |
CEL27297.1 | CEL29976.1 | SRM1_00624 | SRM1_03330 | Cellobiose 2-epimerase. | Hypothetical protein. | 0.418 |
CEL27842.1 | CEL29157.1 | SRM1_01172 | SRM1_02506 | DNA circulation protein N-terminus. | Hypothetical protein. | 0.462 |
CEL27842.1 | CEL29976.1 | SRM1_01172 | SRM1_03330 | DNA circulation protein N-terminus. | Hypothetical protein. | 0.427 |
CEL28710.1 | CEL29157.1 | SRM1_02057 | SRM1_02506 | DNA circulation protein N-terminus. | Hypothetical protein. | 0.459 |
CEL28710.1 | CEL29976.1 | SRM1_02057 | SRM1_03330 | DNA circulation protein N-terminus. | Hypothetical protein. | 0.426 |
CEL29157.1 | CEL27842.1 | SRM1_02506 | SRM1_01172 | Hypothetical protein. | DNA circulation protein N-terminus. | 0.462 |
CEL29157.1 | CEL28710.1 | SRM1_02506 | SRM1_02057 | Hypothetical protein. | DNA circulation protein N-terminus. | 0.459 |
CEL29157.1 | CEL29976.1 | SRM1_02506 | SRM1_03330 | Hypothetical protein. | Hypothetical protein. | 0.451 |
CEL29157.1 | lagD | SRM1_02506 | SRM1_02508 | Hypothetical protein. | Lactococcin-G-processing and transport ATP-binding protein LagD. | 0.920 |
CEL29195.1 | CEL29976.1 | SRM1_02546 | SRM1_03330 | Putative inner membrane protein. | Hypothetical protein. | 0.683 |
CEL29976.1 | CEL27231.1 | SRM1_03330 | SRM1_00556 | Hypothetical protein. | Hypothetical protein. | 0.426 |
CEL29976.1 | CEL27297.1 | SRM1_03330 | SRM1_00624 | Hypothetical protein. | Cellobiose 2-epimerase. | 0.418 |
CEL29976.1 | CEL27842.1 | SRM1_03330 | SRM1_01172 | Hypothetical protein. | DNA circulation protein N-terminus. | 0.427 |
CEL29976.1 | CEL28710.1 | SRM1_03330 | SRM1_02057 | Hypothetical protein. | DNA circulation protein N-terminus. | 0.426 |
CEL29976.1 | CEL29157.1 | SRM1_03330 | SRM1_02506 | Hypothetical protein. | Hypothetical protein. | 0.451 |
CEL29976.1 | CEL29195.1 | SRM1_03330 | SRM1_02546 | Hypothetical protein. | Putative inner membrane protein. | 0.683 |
CEL29976.1 | CEL29977.1 | SRM1_03330 | SRM1_03331 | Hypothetical protein. | Hypothetical protein. | 0.547 |
CEL29976.1 | CEL30787.1 | SRM1_03330 | SRM1_04146 | Hypothetical protein. | Putative inner membrane protein. | 0.472 |
CEL29976.1 | CEL31763.1 | SRM1_03330 | SRM1_05132 | Hypothetical protein. | Alpha/beta hydrolase family protein. | 0.550 |
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