Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL29978.1 | CEL29979.1 | SRM1_03332 | SRM1_03333 | Hydroxyneurosporene synthase (CrtC). | FtsX-like permease family protein. | 0.958 |
| CEL29978.1 | CEL29980.1 | SRM1_03332 | SRM1_03334 | Hydroxyneurosporene synthase (CrtC). | Putative ABC transporter ATP-binding protein/MT1014. | 0.925 |
| CEL29978.1 | macB | SRM1_03332 | SRM1_01945 | Hydroxyneurosporene synthase (CrtC). | Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.422 |
| CEL29979.1 | CEL29978.1 | SRM1_03333 | SRM1_03332 | FtsX-like permease family protein. | Hydroxyneurosporene synthase (CrtC). | 0.958 |
| CEL29979.1 | CEL29980.1 | SRM1_03333 | SRM1_03334 | FtsX-like permease family protein. | Putative ABC transporter ATP-binding protein/MT1014. | 0.980 |
| CEL29979.1 | lolA_2 | SRM1_03333 | SRM1_03427 | FtsX-like permease family protein. | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.740 |
| CEL29979.1 | macB | SRM1_03333 | SRM1_01945 | FtsX-like permease family protein. | Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.885 |
| CEL29980.1 | CEL29978.1 | SRM1_03334 | SRM1_03332 | Putative ABC transporter ATP-binding protein/MT1014. | Hydroxyneurosporene synthase (CrtC). | 0.925 |
| CEL29980.1 | CEL29979.1 | SRM1_03334 | SRM1_03333 | Putative ABC transporter ATP-binding protein/MT1014. | FtsX-like permease family protein. | 0.980 |
| CEL29980.1 | CEL31753.1 | SRM1_03334 | SRM1_05122 | Putative ABC transporter ATP-binding protein/MT1014. | FtsX-like permease family protein. | 0.719 |
| CEL29980.1 | lolA_2 | SRM1_03334 | SRM1_03427 | Putative ABC transporter ATP-binding protein/MT1014. | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.745 |
| CEL29980.1 | lolE_1 | SRM1_03334 | SRM1_03768 | Putative ABC transporter ATP-binding protein/MT1014. | Lipoprotein-releasing system transmembrane protein LolE. | 0.727 |
| CEL29980.1 | lolE_2 | SRM1_03334 | SRM1_03770 | Putative ABC transporter ATP-binding protein/MT1014. | Lipoprotein-releasing system transmembrane protein LolE. | 0.727 |
| CEL29980.1 | macB | SRM1_03334 | SRM1_01945 | Putative ABC transporter ATP-binding protein/MT1014. | Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.839 |
| CEL29980.1 | rpsK | SRM1_03334 | SRM1_05157 | Putative ABC transporter ATP-binding protein/MT1014. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.678 |
| CEL29980.1 | yecS_1 | SRM1_03334 | SRM1_00298 | Putative ABC transporter ATP-binding protein/MT1014. | Inner membrane amino-acid ABC transporter permease protein YecS. | 0.825 |
| CEL29980.1 | znuC_3 | SRM1_03334 | SRM1_05806 | Putative ABC transporter ATP-binding protein/MT1014. | High-affinity zinc uptake system ATP-binding protein ZnuC. | 0.680 |
| CEL31753.1 | CEL29980.1 | SRM1_05122 | SRM1_03334 | FtsX-like permease family protein. | Putative ABC transporter ATP-binding protein/MT1014. | 0.719 |
| CEL31753.1 | lolA_2 | SRM1_05122 | SRM1_03427 | FtsX-like permease family protein. | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.458 |
| CEL31753.1 | macB | SRM1_05122 | SRM1_01945 | FtsX-like permease family protein. | Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.885 |
page 1 of 3