Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL30043.1 | cobB_2 | SRM1_03397 | SRM1_03396 | Cytochrome c-554 precursor. | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | 0.636 |
| CEL31451.1 | cbpA | SRM1_04818 | SRM1_00641 | Hypothetical protein. | Curved DNA-binding protein. | 0.715 |
| CEL31451.1 | cobB_2 | SRM1_04818 | SRM1_03396 | Hypothetical protein. | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | 0.806 |
| CEL31451.1 | dnaJ | SRM1_04818 | SRM1_00810 | Hypothetical protein. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.715 |
| CEL31474.1 | cobB_2 | SRM1_04841 | SRM1_03396 | Hypothetical protein; TfoX C-terminal domain. | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | 0.623 |
| bioI | cobB_2 | SRM1_03251 | SRM1_03396 | Biotin biosynthesis cytochrome P450. | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | 0.931 |
| cbpA | CEL31451.1 | SRM1_00641 | SRM1_04818 | Curved DNA-binding protein. | Hypothetical protein. | 0.715 |
| cbpA | cobB_2 | SRM1_00641 | SRM1_03396 | Curved DNA-binding protein. | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | 0.696 |
| cbpA | dnaK_1 | SRM1_00641 | SRM1_00640 | Curved DNA-binding protein. | Chaperone protein DnaK. | 0.971 |
| cbpA | pta | SRM1_00641 | SRM1_00928 | Curved DNA-binding protein. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.452 |
| cobB_2 | CEL30043.1 | SRM1_03396 | SRM1_03397 | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | Cytochrome c-554 precursor. | 0.636 |
| cobB_2 | CEL31451.1 | SRM1_03396 | SRM1_04818 | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | Hypothetical protein. | 0.806 |
| cobB_2 | CEL31474.1 | SRM1_03396 | SRM1_04841 | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | Hypothetical protein; TfoX C-terminal domain. | 0.623 |
| cobB_2 | bioI | SRM1_03396 | SRM1_03251 | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | Biotin biosynthesis cytochrome P450. | 0.931 |
| cobB_2 | cbpA | SRM1_03396 | SRM1_00641 | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | Curved DNA-binding protein. | 0.696 |
| cobB_2 | dnaJ | SRM1_03396 | SRM1_00810 | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.696 |
| cobB_2 | dnaK_1 | SRM1_03396 | SRM1_00640 | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | Chaperone protein DnaK. | 0.583 |
| cobB_2 | gdhA | SRM1_03396 | SRM1_04925 | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.864 |
| cobB_2 | ldh | SRM1_03396 | SRM1_00960 | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.864 |
| cobB_2 | pta | SRM1_03396 | SRM1_00928 | NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.683 |
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