Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL30969.1 | tatA | SRM1_04332 | SRM1_00433 | RDD family protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.502 |
| CEL30969.1 | tatB | SRM1_04332 | SRM1_00432 | RDD family protein. | Sec-independent protein translocase protein TatB. | 0.531 |
| CEL30969.1 | tatC | SRM1_04332 | SRM1_00431 | RDD family protein. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.478 |
| CEL30969.1 | tatD | SRM1_04332 | SRM1_03972 | RDD family protein. | Tat-linked quality control protein TatD. | 0.627 |
| CEL30969.1 | yajC | SRM1_04332 | SRM1_04664 | RDD family protein. | Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. | 0.485 |
| CEL31011.1 | tatA | SRM1_04375 | SRM1_00433 | RDD family protein. | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.502 |
| CEL31011.1 | tatB | SRM1_04375 | SRM1_00432 | RDD family protein. | Sec-independent protein translocase protein TatB. | 0.531 |
| CEL31011.1 | tatC | SRM1_04375 | SRM1_00431 | RDD family protein. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.478 |
| CEL31011.1 | tatD | SRM1_04375 | SRM1_03972 | RDD family protein. | Tat-linked quality control protein TatD. | 0.579 |
| CEL31011.1 | yajC | SRM1_04375 | SRM1_04664 | RDD family protein. | Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. | 0.446 |
| mcpS_8 | mltF_3 | SRM1_03973 | SRM1_03971 | Methyl-accepting chemotaxis protein McpS. | Membrane-bound lytic murein transglycosylase F precursor; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein [...] | 0.463 |
| mcpS_8 | tatD | SRM1_03973 | SRM1_03972 | Methyl-accepting chemotaxis protein McpS. | Tat-linked quality control protein TatD. | 0.536 |
| metG | tatD | SRM1_04442 | SRM1_03972 | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Tat-linked quality control protein TatD. | 0.562 |
| metG | tpiA | SRM1_04442 | SRM1_00821 | Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.591 |
| mltF_3 | mcpS_8 | SRM1_03971 | SRM1_03973 | Membrane-bound lytic murein transglycosylase F precursor; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein [...] | Methyl-accepting chemotaxis protein McpS. | 0.463 |
| mltF_3 | tatD | SRM1_03971 | SRM1_03972 | Membrane-bound lytic murein transglycosylase F precursor; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein [...] | Tat-linked quality control protein TatD. | 0.557 |
| tatA | CEL30969.1 | SRM1_00433 | SRM1_04332 | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | RDD family protein. | 0.502 |
| tatA | CEL31011.1 | SRM1_00433 | SRM1_04375 | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | RDD family protein. | 0.502 |
| tatA | tatB | SRM1_00433 | SRM1_00432 | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Sec-independent protein translocase protein TatB. | 0.981 |
| tatA | tatC | SRM1_00433 | SRM1_00431 | Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.996 |
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