Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL30657.1 | CEL30659.1 | SRM1_04016 | SRM1_04018 | Hypothetical protein. | Hypothetical protein. | 0.438 |
| CEL30657.1 | aroA | SRM1_04016 | SRM1_04021 | Hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.550 |
| CEL30657.1 | ihfB | SRM1_04016 | SRM1_04017 | Hypothetical protein. | Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.725 |
| CEL30657.1 | pheA | SRM1_04016 | SRM1_04023 | Hypothetical protein. | Prephenate dehydratase. | 0.542 |
| CEL30657.1 | rfbB | SRM1_04016 | SRM1_04015 | Hypothetical protein. | dTDP-glucose 4,6-dehydratase. | 0.447 |
| CEL30657.1 | rfbD | SRM1_04016 | SRM1_04014 | Hypothetical protein. | dTDP-4-dehydrorhamnose reductase. | 0.444 |
| CEL30657.1 | rmlA2 | SRM1_04016 | SRM1_04013 | Hypothetical protein. | Glucose-1-phosphate thymidylyltransferase 2. | 0.468 |
| CEL30659.1 | CEL30657.1 | SRM1_04018 | SRM1_04016 | Hypothetical protein. | Hypothetical protein. | 0.438 |
| CEL30659.1 | ihfB | SRM1_04018 | SRM1_04017 | Hypothetical protein. | Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.509 |
| aroA | CEL30657.1 | SRM1_04021 | SRM1_04016 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Hypothetical protein. | 0.550 |
| aroA | ihfB | SRM1_04021 | SRM1_04017 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 0.650 |
| aroA | pheA | SRM1_04021 | SRM1_04023 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Prephenate dehydratase. | 0.999 |
| ihfB | CEL30657.1 | SRM1_04017 | SRM1_04016 | Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | Hypothetical protein. | 0.725 |
| ihfB | CEL30659.1 | SRM1_04017 | SRM1_04018 | Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | Hypothetical protein. | 0.509 |
| ihfB | aroA | SRM1_04017 | SRM1_04021 | Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.650 |
| ihfB | pheA | SRM1_04017 | SRM1_04023 | Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | Prephenate dehydratase. | 0.690 |
| ihfB | rfbD | SRM1_04017 | SRM1_04014 | Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | dTDP-4-dehydrorhamnose reductase. | 0.402 |
| ihfB | rmlA2 | SRM1_04017 | SRM1_04013 | Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. | Glucose-1-phosphate thymidylyltransferase 2. | 0.400 |
| pheA | CEL30657.1 | SRM1_04023 | SRM1_04016 | Prephenate dehydratase. | Hypothetical protein. | 0.542 |
| pheA | aroA | SRM1_04023 | SRM1_04021 | Prephenate dehydratase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.999 |
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