Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL28394.1 | CEL28395.1 | SRM1_01732 | SRM1_01733 | Branched-chain amino acid transport system / permease component. | L-arabinose transporter permease protein. | 0.975 |
| CEL28394.1 | CEL28397.1 | SRM1_01732 | SRM1_01735 | Branched-chain amino acid transport system / permease component. | Purine-binding protein precursor. | 0.969 |
| CEL28394.1 | araG | SRM1_01732 | SRM1_04088 | Branched-chain amino acid transport system / permease component. | Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. | 0.729 |
| CEL28395.1 | CEL28394.1 | SRM1_01733 | SRM1_01732 | L-arabinose transporter permease protein. | Branched-chain amino acid transport system / permease component. | 0.975 |
| CEL28395.1 | CEL28397.1 | SRM1_01733 | SRM1_01735 | L-arabinose transporter permease protein. | Purine-binding protein precursor. | 0.970 |
| CEL28395.1 | araG | SRM1_01733 | SRM1_04088 | L-arabinose transporter permease protein. | Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. | 0.744 |
| CEL28397.1 | CEL28394.1 | SRM1_01735 | SRM1_01732 | Purine-binding protein precursor. | Branched-chain amino acid transport system / permease component. | 0.969 |
| CEL28397.1 | CEL28395.1 | SRM1_01735 | SRM1_01733 | Purine-binding protein precursor. | L-arabinose transporter permease protein. | 0.970 |
| CEL28397.1 | araG | SRM1_01735 | SRM1_04088 | Purine-binding protein precursor. | Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. | 0.701 |
| araF | araG | SRM1_04089 | SRM1_04088 | L-arabinose-binding periplasmic protein precursor. | Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. | 0.920 |
| araF | rbsB_1 | SRM1_04089 | SRM1_02077 | L-arabinose-binding periplasmic protein precursor. | D-ribose-binding periplasmic protein precursor. | 0.421 |
| araF | rbsC_1 | SRM1_04089 | SRM1_02079 | L-arabinose-binding periplasmic protein precursor. | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | 0.790 |
| araF | rbsC_2 | SRM1_04089 | SRM1_04087 | L-arabinose-binding periplasmic protein precursor. | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | 0.952 |
| araF | rbsD | SRM1_04089 | SRM1_02082 | L-arabinose-binding periplasmic protein precursor. | D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. | 0.783 |
| araG | CEL28394.1 | SRM1_04088 | SRM1_01732 | Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. | Branched-chain amino acid transport system / permease component. | 0.729 |
| araG | CEL28395.1 | SRM1_04088 | SRM1_01733 | Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. | L-arabinose transporter permease protein. | 0.744 |
| araG | CEL28397.1 | SRM1_04088 | SRM1_01735 | Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. | Purine-binding protein precursor. | 0.701 |
| araG | araF | SRM1_04088 | SRM1_04089 | Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. | L-arabinose-binding periplasmic protein precursor. | 0.920 |
| araG | rbsB_1 | SRM1_04088 | SRM1_02077 | Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. | D-ribose-binding periplasmic protein precursor. | 0.936 |
| araG | rbsB_2 | SRM1_04088 | SRM1_02952 | Arabinose import ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family. | D-ribose-binding periplasmic protein precursor. | 0.771 |
page 1 of 3