Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
adhB | iorB_3 | SRM1_00143 | SRM1_04117 | Gluconate 2-dehydrogenase cytochrome c subunit precursor. | Isoquinoline 1-oxidoreductase subunit beta. | 0.888 |
adhB_2 | hcrC_2 | SRM1_02004 | SRM1_02003 | Alcohol dehydrogenase cytochrome c subunit precursor. | 4-hydroxybenzoyl-CoA reductase subunit gamma. | 0.903 |
adhB_2 | iorB_3 | SRM1_02004 | SRM1_04117 | Alcohol dehydrogenase cytochrome c subunit precursor. | Isoquinoline 1-oxidoreductase subunit beta. | 0.894 |
cutS | hcrB | SRM1_02151 | SRM1_02150 | Carbon monoxide dehydrogenase small chain. | 4-hydroxybenzoyl-CoA reductase subunit beta. | 0.994 |
cutS | iorB_3 | SRM1_02151 | SRM1_04117 | Carbon monoxide dehydrogenase small chain. | Isoquinoline 1-oxidoreductase subunit beta. | 0.765 |
cutS | pucA_2 | SRM1_02151 | SRM1_04116 | Carbon monoxide dehydrogenase small chain. | Putative xanthine dehydrogenase subunit A. | 0.777 |
cutS | pucB | SRM1_02151 | SRM1_04115 | Carbon monoxide dehydrogenase small chain. | Purine catabolism protein PucB. | 0.678 |
hcrB | cutS | SRM1_02150 | SRM1_02151 | 4-hydroxybenzoyl-CoA reductase subunit beta. | Carbon monoxide dehydrogenase small chain. | 0.994 |
hcrB | hcrC_2 | SRM1_02150 | SRM1_02003 | 4-hydroxybenzoyl-CoA reductase subunit beta. | 4-hydroxybenzoyl-CoA reductase subunit gamma. | 0.905 |
hcrB | iorA_1 | SRM1_02150 | SRM1_02204 | 4-hydroxybenzoyl-CoA reductase subunit beta. | Isoquinoline 1-oxidoreductase subunit alpha. | 0.840 |
hcrB | iorA_2 | SRM1_02150 | SRM1_03200 | 4-hydroxybenzoyl-CoA reductase subunit beta. | Isoquinoline 1-oxidoreductase subunit alpha. | 0.840 |
hcrB | iorA_3 | SRM1_02150 | SRM1_04118 | 4-hydroxybenzoyl-CoA reductase subunit beta. | Isoquinoline 1-oxidoreductase subunit alpha. | 0.814 |
hcrB | iorB_3 | SRM1_02150 | SRM1_04117 | 4-hydroxybenzoyl-CoA reductase subunit beta. | Isoquinoline 1-oxidoreductase subunit beta. | 0.800 |
hcrB | pucA_2 | SRM1_02150 | SRM1_04116 | 4-hydroxybenzoyl-CoA reductase subunit beta. | Putative xanthine dehydrogenase subunit A. | 0.528 |
hcrB | pucB | SRM1_02150 | SRM1_04115 | 4-hydroxybenzoyl-CoA reductase subunit beta. | Purine catabolism protein PucB. | 0.622 |
hcrC_2 | adhB_2 | SRM1_02003 | SRM1_02004 | 4-hydroxybenzoyl-CoA reductase subunit gamma. | Alcohol dehydrogenase cytochrome c subunit precursor. | 0.903 |
hcrC_2 | hcrB | SRM1_02003 | SRM1_02150 | 4-hydroxybenzoyl-CoA reductase subunit gamma. | 4-hydroxybenzoyl-CoA reductase subunit beta. | 0.905 |
hcrC_2 | iorB_3 | SRM1_02003 | SRM1_04117 | 4-hydroxybenzoyl-CoA reductase subunit gamma. | Isoquinoline 1-oxidoreductase subunit beta. | 0.841 |
hcrC_2 | pucA_2 | SRM1_02003 | SRM1_04116 | 4-hydroxybenzoyl-CoA reductase subunit gamma. | Putative xanthine dehydrogenase subunit A. | 0.800 |
hcrC_2 | pucB | SRM1_02003 | SRM1_04115 | 4-hydroxybenzoyl-CoA reductase subunit gamma. | Purine catabolism protein PucB. | 0.694 |
page 1 of 3