Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL29364.1 | CEL30923.1 | SRM1_02715 | SRM1_04286 | Hypothetical protein. | Ribonuclease BN/unknown domain fusion protein. | 0.456 |
| CEL30767.1 | CEL30923.1 | SRM1_04126 | SRM1_04286 | ComEC family competence protein. | Ribonuclease BN/unknown domain fusion protein. | 0.521 |
| CEL30767.1 | polA | SRM1_04126 | SRM1_00115 | ComEC family competence protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.512 |
| CEL30923.1 | CEL29364.1 | SRM1_04286 | SRM1_02715 | Ribonuclease BN/unknown domain fusion protein. | Hypothetical protein. | 0.456 |
| CEL30923.1 | CEL30767.1 | SRM1_04286 | SRM1_04126 | Ribonuclease BN/unknown domain fusion protein. | ComEC family competence protein. | 0.521 |
| CEL30923.1 | CEL30930.1 | SRM1_04286 | SRM1_04293 | Ribonuclease BN/unknown domain fusion protein. | Hypothetical protein. | 0.490 |
| CEL30923.1 | chaA | SRM1_04286 | SRM1_00741 | Ribonuclease BN/unknown domain fusion protein. | Sodium/proton antiporter ChaA. | 0.429 |
| CEL30923.1 | csbD | SRM1_04286 | SRM1_04287 | Ribonuclease BN/unknown domain fusion protein. | Stress response protein CsbD. | 0.666 |
| CEL30923.1 | def_2 | SRM1_04286 | SRM1_04285 | Ribonuclease BN/unknown domain fusion protein. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.805 |
| CEL30923.1 | polA | SRM1_04286 | SRM1_00115 | Ribonuclease BN/unknown domain fusion protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.411 |
| CEL30923.1 | yegS | SRM1_04286 | SRM1_03857 | Ribonuclease BN/unknown domain fusion protein. | Lipid kinase YegS; Probably phosphorylates lipids; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily. | 0.413 |
| CEL30930.1 | CEL30923.1 | SRM1_04293 | SRM1_04286 | Hypothetical protein. | Ribonuclease BN/unknown domain fusion protein. | 0.490 |
| chaA | CEL30923.1 | SRM1_00741 | SRM1_04286 | Sodium/proton antiporter ChaA. | Ribonuclease BN/unknown domain fusion protein. | 0.429 |
| csbD | CEL30923.1 | SRM1_04287 | SRM1_04286 | Stress response protein CsbD. | Ribonuclease BN/unknown domain fusion protein. | 0.666 |
| csbD | def_2 | SRM1_04287 | SRM1_04285 | Stress response protein CsbD. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.505 |
| def_2 | CEL30923.1 | SRM1_04285 | SRM1_04286 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Ribonuclease BN/unknown domain fusion protein. | 0.805 |
| def_2 | csbD | SRM1_04285 | SRM1_04287 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Stress response protein CsbD. | 0.505 |
| def_2 | polA | SRM1_04285 | SRM1_00115 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.458 |
| polA | CEL30767.1 | SRM1_00115 | SRM1_04126 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | ComEC family competence protein. | 0.512 |
| polA | CEL30923.1 | SRM1_00115 | SRM1_04286 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Ribonuclease BN/unknown domain fusion protein. | 0.411 |
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