fadD_2 protein (Pseudomonas fluorescens) - STRING interaction network

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fadD_2

Long-chain-fatty-acid--CoA ligase. (565 aa)

Predicted Functional Partners:

lgrD

0.930

lplT

0.926

fadB_3

0.759

fadE

0.715

rplF

0.707

mmgC_7

0.680

acrC

0.675

mmgC_8

0.675

bioI

0.664

lgrB_2

0.663

Your Current Organism:

Pseudomonas fluorescens

NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
acrC	fadB_3	SRM1_05269	SRM1_03790	Acryloyl-CoA reductase (NADH).	Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.	0.826
acrC	fadD_2	SRM1_05269	SRM1_04289	Acryloyl-CoA reductase (NADH).	Long-chain-fatty-acid--CoA ligase.	0.675
acrC	mmgC_7	SRM1_05269	SRM1_05268	Acryloyl-CoA reductase (NADH).	Acyl-CoA dehydrogenase.	0.546
bioI	fadD_2	SRM1_03251	SRM1_04289	Biotin biosynthesis cytochrome P450.	Long-chain-fatty-acid--CoA ligase.	0.664
bioI	lgrB_2	SRM1_03251	SRM1_01935	Biotin biosynthesis cytochrome P450.	Linear gramicidin synthase subunit B.	0.795
bioI	lgrD	SRM1_03251	SRM1_00182	Biotin biosynthesis cytochrome P450.	Linear gramicidin synthase subunit D.	0.989
bioI	rplF	SRM1_03251	SRM1_05164	Biotin biosynthesis cytochrome P450.	50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.939
fadB_3	acrC	SRM1_03790	SRM1_05269	Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.	Acryloyl-CoA reductase (NADH).	0.826
fadB_3	fadD_2	SRM1_03790	SRM1_04289	Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.	Long-chain-fatty-acid--CoA ligase.	0.759
fadB_3	fadE	SRM1_03790	SRM1_04132	Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.	Acyl-coenzyme A dehydrogenase.	0.911
fadB_3	lgrD	SRM1_03790	SRM1_00182	Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.	Linear gramicidin synthase subunit D.	0.743
fadB_3	mmgC_7	SRM1_03790	SRM1_05268	Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.	Acyl-CoA dehydrogenase.	0.824
fadB_3	mmgC_8	SRM1_03790	SRM1_05271	Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.	Acyl-CoA dehydrogenase.	0.835
fadB_3	rplF	SRM1_03790	SRM1_05164	Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.	50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.488
fadD_2	acrC	SRM1_04289	SRM1_05269	Long-chain-fatty-acid--CoA ligase.	Acryloyl-CoA reductase (NADH).	0.675
fadD_2	bioI	SRM1_04289	SRM1_03251	Long-chain-fatty-acid--CoA ligase.	Biotin biosynthesis cytochrome P450.	0.664
fadD_2	fadB_3	SRM1_04289	SRM1_03790	Long-chain-fatty-acid--CoA ligase.	Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.	0.759
fadD_2	fadE	SRM1_04289	SRM1_04132	Long-chain-fatty-acid--CoA ligase.	Acyl-coenzyme A dehydrogenase.	0.715
fadD_2	lgrB_2	SRM1_04289	SRM1_01935	Long-chain-fatty-acid--CoA ligase.	Linear gramicidin synthase subunit B.	0.663
fadD_2	lgrD	SRM1_04289	SRM1_00182	Long-chain-fatty-acid--CoA ligase.	Linear gramicidin synthase subunit D.	0.930

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