Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL29839.1 | gpmA_1 | SRM1_03193 | SRM1_02957 | Phosphotransferase enzyme family protein. | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase. | 0.801 |
| CEL29839.1 | nasC | SRM1_03193 | SRM1_04460 | Phosphotransferase enzyme family protein. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.689 |
| CEL30043.1 | fdoH | SRM1_03397 | SRM1_02536 | Cytochrome c-554 precursor. | Formate dehydrogenase-O iron-sulfur subunit. | 0.976 |
| CEL30043.1 | nasC | SRM1_03397 | SRM1_04460 | Cytochrome c-554 precursor. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.754 |
| CEL30043.1 | petA | SRM1_03397 | SRM1_04740 | Cytochrome c-554 precursor. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
| CEL30043.1 | tuf1_1 | SRM1_03397 | SRM1_05181 | Cytochrome c-554 precursor. | Elongation factor Tu. | 0.831 |
| CEL30043.1 | tuf1_2 | SRM1_03397 | SRM1_05194 | Cytochrome c-554 precursor. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.831 |
| fdhD | fdoH | SRM1_00330 | SRM1_02536 | Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Formate dehydrogenase-O iron-sulfur subunit. | 0.502 |
| fdhD | moeA | SRM1_00330 | SRM1_03859 | Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.596 |
| fdhD | nasC | SRM1_00330 | SRM1_04460 | Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.610 |
| fdoH | CEL30043.1 | SRM1_02536 | SRM1_03397 | Formate dehydrogenase-O iron-sulfur subunit. | Cytochrome c-554 precursor. | 0.976 |
| fdoH | fdhD | SRM1_02536 | SRM1_00330 | Formate dehydrogenase-O iron-sulfur subunit. | Protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.502 |
| fdoH | gltB | SRM1_02536 | SRM1_00466 | Formate dehydrogenase-O iron-sulfur subunit. | Glutamate synthase [NADPH] large chain precursor. | 0.507 |
| fdoH | nasC | SRM1_02536 | SRM1_04460 | Formate dehydrogenase-O iron-sulfur subunit. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.956 |
| fdoH | petA | SRM1_02536 | SRM1_04740 | Formate dehydrogenase-O iron-sulfur subunit. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.406 |
| fdoH | tuf1_1 | SRM1_02536 | SRM1_05181 | Formate dehydrogenase-O iron-sulfur subunit. | Elongation factor Tu. | 0.836 |
| fdoH | tuf1_2 | SRM1_02536 | SRM1_05194 | Formate dehydrogenase-O iron-sulfur subunit. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.836 |
| gltB | fdoH | SRM1_00466 | SRM1_02536 | Glutamate synthase [NADPH] large chain precursor. | Formate dehydrogenase-O iron-sulfur subunit. | 0.507 |
| gltB | gpmA_1 | SRM1_00466 | SRM1_02957 | Glutamate synthase [NADPH] large chain precursor. | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase. | 0.467 |
| gltB | nasC | SRM1_00466 | SRM1_04460 | Glutamate synthase [NADPH] large chain precursor. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.759 |
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