STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltKGlutamate/aspartate transport system permease protein GltK. (223 aa)    
Predicted Functional Partners:
gltI_2
Glutamate/aspartate periplasmic-binding protein precursor.
 
 0.999
glnQ_6
Glutamine transport ATP-binding protein GlnQ.
 0.999
glnM_2
Putative glutamine ABC transporter permease protein GlnM.
 
 
0.998
fliY_1
Cystine-binding periplasmic protein precursor.
 0.980
glnQ_1
Glutamine transport ATP-binding protein GlnQ.
 0.971
glnQ_3
Glutamine transport ATP-binding protein GlnQ.
 0.967
glnM_1
Putative glutamine ABC transporter permease protein GlnM.
 
0.936
argT_2
Lysine-arginine-ornithine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family.
 0.924
tcyC
L-cystine import ATP-binding protein TcyC.
 0.922
fliY_2
Cystine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family.
 0.917
Your Current Organism:
Pseudomonas fluorescens
NCBI taxonomy Id: 294
Other names: ATCC 13525, Bacillus fluorescens, Bacillus fluorescens liquefaciens, Bacterium fluorescen, CCEB 546, CFBP 2102, CIP 69.13, DSM 50090, IAM 12022, IFO 14160, JCM 5963, Liquidomonas fluorescens, NBRC 14160, NCCB 76040, NCIB 9046, NCIB:9046, NCIMB 9046, NCTC 10038, NRRL B-14678, P. fluorescens, Pseudomonas sp. AU2390, Pseudomonas sp. BZ64, Pseudomonas sp. FY32, Pseudomonas sp. HSA2/2016, Pseudomonas sp. HSA3/2016, Pseudomonas sp. ISSDS-433, Pseudomonas sp. JCM 17186, Pseudomonas sp. JCM 2779, Pseudomonas sp. KH-20150KS3, Pseudomonas sp. LBUM223, Pseudomonas sp. LBUM636, Pseudomonas sp. SM2/2016, RH 818, VKM B-894, bacterium P1-1, strain M. Rhodes 28/5
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