Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL27124.1 | CEL31470.1 | SRM1_00449 | SRM1_04837 | Cell division protein FtsN. | Hypothetical protein. | 0.411 |
| CEL27124.1 | ftsI | SRM1_00449 | SRM1_04727 | Cell division protein FtsN. | Peptidoglycan synthase FtsI precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | 0.812 |
| CEL27124.1 | ftsW | SRM1_00449 | SRM1_04722 | Cell division protein FtsN. | Lipid II flippase FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.795 |
| CEL27124.1 | mrcB | SRM1_00449 | SRM1_04838 | Cell division protein FtsN. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.838 |
| CEL27124.1 | mrdB | SRM1_00449 | SRM1_05044 | Cell division protein FtsN. | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.516 |
| CEL27124.1 | spoVD_1 | SRM1_00449 | SRM1_03806 | Cell division protein FtsN. | Stage V sporulation protein D; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.464 |
| CEL31469.1 | CEL31470.1 | SRM1_04836 | SRM1_04837 | Hypothetical protein. | Hypothetical protein. | 0.805 |
| CEL31469.1 | CEL31472.1 | SRM1_04836 | SRM1_04839 | Hypothetical protein. | Hypothetical protein. | 0.657 |
| CEL31469.1 | mrcB | SRM1_04836 | SRM1_04838 | Hypothetical protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.777 |
| CEL31470.1 | CEL27124.1 | SRM1_04837 | SRM1_00449 | Hypothetical protein. | Cell division protein FtsN. | 0.411 |
| CEL31470.1 | CEL31469.1 | SRM1_04837 | SRM1_04836 | Hypothetical protein. | Hypothetical protein. | 0.805 |
| CEL31470.1 | CEL31472.1 | SRM1_04837 | SRM1_04839 | Hypothetical protein. | Hypothetical protein. | 0.644 |
| CEL31470.1 | mrcB | SRM1_04837 | SRM1_04838 | Hypothetical protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.928 |
| CEL31472.1 | CEL31469.1 | SRM1_04839 | SRM1_04836 | Hypothetical protein. | Hypothetical protein. | 0.657 |
| CEL31472.1 | CEL31470.1 | SRM1_04839 | SRM1_04837 | Hypothetical protein. | Hypothetical protein. | 0.644 |
| CEL31472.1 | mrcB | SRM1_04839 | SRM1_04838 | Hypothetical protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.693 |
| CEL32239.1 | mrcB | SRM1_05613 | SRM1_04838 | Hypothetical protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.779 |
| ftsI | CEL27124.1 | SRM1_04727 | SRM1_00449 | Peptidoglycan synthase FtsI precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | Cell division protein FtsN. | 0.812 |
| ftsI | ftsW | SRM1_04727 | SRM1_04722 | Peptidoglycan synthase FtsI precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | Lipid II flippase FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.980 |
| ftsI | mrcB | SRM1_04727 | SRM1_04838 | Peptidoglycan synthase FtsI precursor; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.834 |
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