Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL30510.1 | CEL31494.1 | SRM1_03869 | SRM1_04861 | Hypothetical protein. | Hypothetical protein. | 0.520 |
| CEL31494.1 | CEL30510.1 | SRM1_04861 | SRM1_03869 | Hypothetical protein. | Hypothetical protein. | 0.520 |
| CEL31494.1 | CEL31496.1 | SRM1_04861 | SRM1_04863 | Hypothetical protein. | AsmA family protein. | 0.400 |
| CEL31494.1 | CEL31497.1 | SRM1_04861 | SRM1_04864 | Hypothetical protein. | Hypothetical protein. | 0.432 |
| CEL31494.1 | acsA_2 | SRM1_04861 | SRM1_04860 | Hypothetical protein. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.636 |
| CEL31494.1 | hxuB_1 | SRM1_04861 | SRM1_00720 | Hypothetical protein. | Heme/hemopexin transporter protein HuxB precursor. | 0.508 |
| CEL31494.1 | pgi | SRM1_04861 | SRM1_04859 | Hypothetical protein. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.450 |
| CEL31494.1 | rlmI_1 | SRM1_04861 | SRM1_04862 | Hypothetical protein. | Ribosomal RNA large subunit methyltransferase I; Belongs to the methyltransferase superfamily. | 0.589 |
| CEL31494.1 | viuB | SRM1_04861 | SRM1_02072 | Hypothetical protein. | Vibriobactin utilization protein ViuB. | 0.406 |
| CEL31496.1 | CEL31494.1 | SRM1_04863 | SRM1_04861 | AsmA family protein. | Hypothetical protein. | 0.400 |
| CEL31496.1 | CEL31497.1 | SRM1_04863 | SRM1_04864 | AsmA family protein. | Hypothetical protein. | 0.807 |
| CEL31496.1 | rlmI_1 | SRM1_04863 | SRM1_04862 | AsmA family protein. | Ribosomal RNA large subunit methyltransferase I; Belongs to the methyltransferase superfamily. | 0.572 |
| CEL31497.1 | CEL31494.1 | SRM1_04864 | SRM1_04861 | Hypothetical protein. | Hypothetical protein. | 0.432 |
| CEL31497.1 | CEL31496.1 | SRM1_04864 | SRM1_04863 | Hypothetical protein. | AsmA family protein. | 0.807 |
| CEL31497.1 | rlmI_1 | SRM1_04864 | SRM1_04862 | Hypothetical protein. | Ribosomal RNA large subunit methyltransferase I; Belongs to the methyltransferase superfamily. | 0.572 |
| acsA_2 | CEL31494.1 | SRM1_04860 | SRM1_04861 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Hypothetical protein. | 0.636 |
| acsA_2 | pgi | SRM1_04860 | SRM1_04859 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.535 |
| acsA_2 | rlmI_1 | SRM1_04860 | SRM1_04862 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | Ribosomal RNA large subunit methyltransferase I; Belongs to the methyltransferase superfamily. | 0.444 |
| hxuB_1 | CEL31494.1 | SRM1_00720 | SRM1_04861 | Heme/hemopexin transporter protein HuxB precursor. | Hypothetical protein. | 0.508 |
| pgi | CEL31494.1 | SRM1_04859 | SRM1_04861 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Hypothetical protein. | 0.450 |
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