Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL31930.1 | antA | SRM1_05304 | SRM1_05313 | Sarcosine oxidase, gamma subunit family. | Anthranilate 1,2-dioxygenase large subunit. | 0.902 |
| CEL31930.1 | gcvT_2 | SRM1_05304 | SRM1_05305 | Sarcosine oxidase, gamma subunit family. | Aminomethyltransferase; Belongs to the GcvT family. | 0.999 |
| CEL31930.1 | glyA2_2 | SRM1_05304 | SRM1_05308 | Sarcosine oxidase, gamma subunit family. | Serine hydroxymethyltransferase 2; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.504 |
| CEL31930.1 | hcr_1 | SRM1_05304 | SRM1_05312 | Sarcosine oxidase, gamma subunit family. | NADH oxidoreductase hcr. | 0.817 |
| CEL31930.1 | soxB | SRM1_05304 | SRM1_05307 | Sarcosine oxidase, gamma subunit family. | Sarcosine oxidase subunit beta. | 0.929 |
| CEL31930.1 | soxD | SRM1_05304 | SRM1_05306 | Sarcosine oxidase, gamma subunit family. | Sarcosine oxidase, delta subunit family. | 0.994 |
| antA | CEL31930.1 | SRM1_05313 | SRM1_05304 | Anthranilate 1,2-dioxygenase large subunit. | Sarcosine oxidase, gamma subunit family. | 0.902 |
| antA | gcvT_2 | SRM1_05313 | SRM1_05305 | Anthranilate 1,2-dioxygenase large subunit. | Aminomethyltransferase; Belongs to the GcvT family. | 0.888 |
| antA | hcr_1 | SRM1_05313 | SRM1_05312 | Anthranilate 1,2-dioxygenase large subunit. | NADH oxidoreductase hcr. | 0.973 |
| antA | soxB | SRM1_05313 | SRM1_05307 | Anthranilate 1,2-dioxygenase large subunit. | Sarcosine oxidase subunit beta. | 0.748 |
| antA | soxD | SRM1_05313 | SRM1_05306 | Anthranilate 1,2-dioxygenase large subunit. | Sarcosine oxidase, delta subunit family. | 0.914 |
| gcvH_1 | gcvP_1 | SRM1_04327 | SRM1_04328 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
| gcvH_1 | gcvP_2 | SRM1_04327 | SRM1_05571 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine dehydrogenase (decarboxylating). | 0.999 |
| gcvH_1 | gcvT_2 | SRM1_04327 | SRM1_05305 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Aminomethyltransferase; Belongs to the GcvT family. | 0.962 |
| gcvH_1 | glyA2_2 | SRM1_04327 | SRM1_05308 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Serine hydroxymethyltransferase 2; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.617 |
| gcvH_2 | gcvP_1 | SRM1_05572 | SRM1_04328 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.999 |
| gcvH_2 | gcvP_2 | SRM1_05572 | SRM1_05571 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Glycine dehydrogenase (decarboxylating). | 0.999 |
| gcvH_2 | gcvT_2 | SRM1_05572 | SRM1_05305 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Aminomethyltransferase; Belongs to the GcvT family. | 0.981 |
| gcvH_2 | glyA2_2 | SRM1_05572 | SRM1_05308 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | Serine hydroxymethyltransferase 2; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.625 |
| gcvP_1 | gcvH_1 | SRM1_04328 | SRM1_04327 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
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