Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL27234.1 | CEL27356.1 | SRM1_00559 | SRM1_00683 | Hypothetical protein. | Hypothetical protein. | 0.600 |
CEL27234.1 | CEL28197.1 | SRM1_00559 | SRM1_01531 | Hypothetical protein. | Hpt domain protein. | 0.703 |
CEL27234.1 | CEL31468.1 | SRM1_00559 | SRM1_04835 | Hypothetical protein. | Hypothetical protein. | 0.684 |
CEL27234.1 | CEL32022.1 | SRM1_00559 | SRM1_05396 | Hypothetical protein. | CheW-like domain protein. | 0.754 |
CEL27234.1 | CEL32207.1 | SRM1_00559 | SRM1_05581 | Hypothetical protein. | Hypothetical protein. | 0.651 |
CEL27234.1 | cheA_2 | SRM1_00559 | SRM1_05397 | Hypothetical protein. | Chemotaxis protein CheA. | 0.677 |
CEL27234.1 | mcpS_10 | SRM1_00559 | SRM1_05398 | Hypothetical protein. | Methyl-accepting chemotaxis protein McpS. | 0.725 |
CEL27234.1 | pleD_6 | SRM1_00559 | SRM1_05400 | Hypothetical protein. | Response regulator PleD. | 0.555 |
CEL27234.1 | walR | SRM1_00559 | SRM1_05401 | Hypothetical protein. | Transcriptional regulatory protein WalR. | 0.594 |
CEL27356.1 | CEL27234.1 | SRM1_00683 | SRM1_00559 | Hypothetical protein. | Hypothetical protein. | 0.600 |
CEL27356.1 | CEL28197.1 | SRM1_00683 | SRM1_01531 | Hypothetical protein. | Hpt domain protein. | 0.558 |
CEL27356.1 | CEL32022.1 | SRM1_00683 | SRM1_05396 | Hypothetical protein. | CheW-like domain protein. | 0.736 |
CEL27356.1 | CEL32207.1 | SRM1_00683 | SRM1_05581 | Hypothetical protein. | Hypothetical protein. | 0.691 |
CEL27356.1 | cheA_2 | SRM1_00683 | SRM1_05397 | Hypothetical protein. | Chemotaxis protein CheA. | 0.695 |
CEL27356.1 | cheW_2 | SRM1_00683 | SRM1_05399 | Hypothetical protein. | Chemotaxis protein CheW. | 0.479 |
CEL27356.1 | mcpS_10 | SRM1_00683 | SRM1_05398 | Hypothetical protein. | Methyl-accepting chemotaxis protein McpS. | 0.597 |
CEL27356.1 | walR | SRM1_00683 | SRM1_05401 | Hypothetical protein. | Transcriptional regulatory protein WalR. | 0.434 |
CEL28197.1 | CEL27234.1 | SRM1_01531 | SRM1_00559 | Hpt domain protein. | Hypothetical protein. | 0.703 |
CEL28197.1 | CEL27356.1 | SRM1_01531 | SRM1_00683 | Hpt domain protein. | Hypothetical protein. | 0.558 |
CEL28197.1 | CEL31468.1 | SRM1_01531 | SRM1_04835 | Hpt domain protein. | Hypothetical protein. | 0.494 |
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