Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CEL28586.1 | CEL30105.1 | SRM1_01925 | SRM1_03459 | CAAX amino terminal protease self-immunity. | YcaO-like family protein. | 0.745 |
| CEL28586.1 | yadH | SRM1_01925 | SRM1_04128 | CAAX amino terminal protease self-immunity. | Inner membrane transport permease YadH. | 0.443 |
| CEL28586.1 | ybhF | SRM1_01925 | SRM1_05587 | CAAX amino terminal protease self-immunity. | Putative ABC transporter ATP-binding protein YbhF. | 0.646 |
| CEL28586.1 | ycaO | SRM1_01925 | SRM1_02313 | CAAX amino terminal protease self-immunity. | Ribosomal protein S12 methylthiotransferase accessory factor YcaO. | 0.721 |
| CEL28586.1 | yhhJ | SRM1_01925 | SRM1_05588 | CAAX amino terminal protease self-immunity. | Inner membrane transport permease YhhJ. | 0.443 |
| CEL30105.1 | CEL28586.1 | SRM1_03459 | SRM1_01925 | YcaO-like family protein. | CAAX amino terminal protease self-immunity. | 0.745 |
| CEL30105.1 | yadH | SRM1_03459 | SRM1_04128 | YcaO-like family protein. | Inner membrane transport permease YadH. | 0.458 |
| CEL30105.1 | ybhF | SRM1_03459 | SRM1_05587 | YcaO-like family protein. | Putative ABC transporter ATP-binding protein YbhF. | 0.622 |
| CEL30105.1 | yhhJ | SRM1_03459 | SRM1_05588 | YcaO-like family protein. | Inner membrane transport permease YhhJ. | 0.458 |
| atpD | lgrD | SRM1_00041 | SRM1_00182 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | Linear gramicidin synthase subunit D. | 0.491 |
| atpD | ybhF | SRM1_00041 | SRM1_05587 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | Putative ABC transporter ATP-binding protein YbhF. | 0.626 |
| lgrD | atpD | SRM1_00182 | SRM1_00041 | Linear gramicidin synthase subunit D. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.491 |
| lgrD | macB | SRM1_00182 | SRM1_01945 | Linear gramicidin synthase subunit D. | Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.641 |
| lgrD | prkC | SRM1_00182 | SRM1_01871 | Linear gramicidin synthase subunit D. | Serine/threonine-protein kinase PrkC. | 0.442 |
| lgrD | ybhF | SRM1_00182 | SRM1_05587 | Linear gramicidin synthase subunit D. | Putative ABC transporter ATP-binding protein YbhF. | 0.621 |
| macB | lgrD | SRM1_01945 | SRM1_00182 | Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | Linear gramicidin synthase subunit D. | 0.641 |
| macB | mdtN_2 | SRM1_01945 | SRM1_05586 | Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | Multidrug resistance protein MdtN. | 0.800 |
| macB | prkC | SRM1_01945 | SRM1_01871 | Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | Serine/threonine-protein kinase PrkC. | 0.518 |
| macB | yadH | SRM1_01945 | SRM1_04128 | Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | Inner membrane transport permease YadH. | 0.473 |
| macB | ybhF | SRM1_01945 | SRM1_05587 | Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | Putative ABC transporter ATP-binding protein YbhF. | 0.640 |
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