Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
argT_1 | glnQ_4 | SRM1_01009 | SRM1_02929 | Lysine-arginine-ornithine-binding periplasmic protein precursor. | Glutamine transport ATP-binding protein GlnQ. | 0.717 |
argT_1 | glnQ_7 | SRM1_01009 | SRM1_05603 | Lysine-arginine-ornithine-binding periplasmic protein precursor. | Glutamine transport ATP-binding protein GlnQ. | 0.668 |
argT_1 | occP_2 | SRM1_01009 | SRM1_01725 | Lysine-arginine-ornithine-binding periplasmic protein precursor. | Octopine permease ATP-binding protein P. | 0.782 |
argT_1 | tcyC | SRM1_01009 | SRM1_00297 | Lysine-arginine-ornithine-binding periplasmic protein precursor. | L-cystine import ATP-binding protein TcyC. | 0.779 |
argT_1 | yecS_4 | SRM1_01009 | SRM1_05601 | Lysine-arginine-ornithine-binding periplasmic protein precursor. | Inner membrane amino-acid ABC transporter permease protein YecS. | 0.927 |
argT_1 | yecS_5 | SRM1_01009 | SRM1_05602 | Lysine-arginine-ornithine-binding periplasmic protein precursor. | Inner membrane amino-acid ABC transporter permease protein YecS. | 0.873 |
artJ_1 | glnQ_4 | SRM1_00360 | SRM1_02929 | ABC transporter arginine-binding protein 1 precursor. | Glutamine transport ATP-binding protein GlnQ. | 0.686 |
artJ_1 | glnQ_7 | SRM1_00360 | SRM1_05603 | ABC transporter arginine-binding protein 1 precursor. | Glutamine transport ATP-binding protein GlnQ. | 0.638 |
artJ_1 | occP_2 | SRM1_00360 | SRM1_01725 | ABC transporter arginine-binding protein 1 precursor. | Octopine permease ATP-binding protein P. | 0.767 |
artJ_1 | tcyC | SRM1_00360 | SRM1_00297 | ABC transporter arginine-binding protein 1 precursor. | L-cystine import ATP-binding protein TcyC. | 0.746 |
artJ_1 | yecS_4 | SRM1_00360 | SRM1_05601 | ABC transporter arginine-binding protein 1 precursor. | Inner membrane amino-acid ABC transporter permease protein YecS. | 0.872 |
artJ_1 | yecS_5 | SRM1_00360 | SRM1_05602 | ABC transporter arginine-binding protein 1 precursor. | Inner membrane amino-acid ABC transporter permease protein YecS. | 0.872 |
fliY_1 | glnQ_4 | SRM1_00299 | SRM1_02929 | Cystine-binding periplasmic protein precursor. | Glutamine transport ATP-binding protein GlnQ. | 0.751 |
fliY_1 | glnQ_7 | SRM1_00299 | SRM1_05603 | Cystine-binding periplasmic protein precursor. | Glutamine transport ATP-binding protein GlnQ. | 0.707 |
fliY_1 | occP_2 | SRM1_00299 | SRM1_01725 | Cystine-binding periplasmic protein precursor. | Octopine permease ATP-binding protein P. | 0.777 |
fliY_1 | tcyC | SRM1_00299 | SRM1_00297 | Cystine-binding periplasmic protein precursor. | L-cystine import ATP-binding protein TcyC. | 0.960 |
fliY_1 | yecS_4 | SRM1_00299 | SRM1_05601 | Cystine-binding periplasmic protein precursor. | Inner membrane amino-acid ABC transporter permease protein YecS. | 0.978 |
fliY_1 | yecS_5 | SRM1_00299 | SRM1_05602 | Cystine-binding periplasmic protein precursor. | Inner membrane amino-acid ABC transporter permease protein YecS. | 0.979 |
fliY_2 | glnQ_4 | SRM1_00425 | SRM1_02929 | Cystine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family. | Glutamine transport ATP-binding protein GlnQ. | 0.757 |
fliY_2 | glnQ_7 | SRM1_00425 | SRM1_05603 | Cystine-binding periplasmic protein precursor; Belongs to the bacterial solute-binding protein 3 family. | Glutamine transport ATP-binding protein GlnQ. | 0.724 |
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