Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEL29400.1 | adrA_1 | SRM1_02751 | SRM1_02207 | Blue-light-activated protein. | Putative diguanylate cyclase AdrA. | 0.973 |
CEL29400.1 | gmr_2 | SRM1_02751 | SRM1_02312 | Blue-light-activated protein. | Cyclic di-GMP phosphodiesterase Gmr. | 0.973 |
CEL29400.1 | gmr_6 | SRM1_02751 | SRM1_04927 | Blue-light-activated protein. | Cyclic di-GMP phosphodiesterase Gmr. | 0.912 |
CEL29400.1 | gmr_8 | SRM1_02751 | SRM1_05654 | Blue-light-activated protein. | Cyclic di-GMP phosphodiesterase Gmr. | 0.897 |
CEL29400.1 | hupR1 | SRM1_02751 | SRM1_04483 | Blue-light-activated protein. | Hydrogenase transcriptional regulatory protein hupR1. | 0.640 |
CEL29400.1 | pdtaS | SRM1_02751 | SRM1_02722 | Blue-light-activated protein. | Putative sensor histidine kinase pdtaS. | 0.955 |
CEL29400.1 | pfyP_1 | SRM1_02751 | SRM1_00943 | Blue-light-activated protein. | Blue-light photoreceptor. | 0.548 |
CEL29400.1 | pfyP_2 | SRM1_02751 | SRM1_02582 | Blue-light-activated protein. | Blue-light photoreceptor. | 0.545 |
CEL29400.1 | ydaM_1 | SRM1_02751 | SRM1_00244 | Blue-light-activated protein. | Putative diguanylate cyclase YdaM. | 0.780 |
CEL29400.1 | yegE | SRM1_02751 | SRM1_04033 | Blue-light-activated protein. | Putative diguanylate cyclase YegE. | 0.952 |
adrA_1 | CEL29400.1 | SRM1_02207 | SRM1_02751 | Putative diguanylate cyclase AdrA. | Blue-light-activated protein. | 0.973 |
adrA_1 | gmr_2 | SRM1_02207 | SRM1_02312 | Putative diguanylate cyclase AdrA. | Cyclic di-GMP phosphodiesterase Gmr. | 0.965 |
adrA_1 | gmr_6 | SRM1_02207 | SRM1_04927 | Putative diguanylate cyclase AdrA. | Cyclic di-GMP phosphodiesterase Gmr. | 0.891 |
adrA_1 | gmr_8 | SRM1_02207 | SRM1_05654 | Putative diguanylate cyclase AdrA. | Cyclic di-GMP phosphodiesterase Gmr. | 0.936 |
adrA_1 | hupR1 | SRM1_02207 | SRM1_04483 | Putative diguanylate cyclase AdrA. | Hydrogenase transcriptional regulatory protein hupR1. | 0.435 |
adrA_1 | pdtaS | SRM1_02207 | SRM1_02722 | Putative diguanylate cyclase AdrA. | Putative sensor histidine kinase pdtaS. | 0.613 |
adrA_1 | pfyP_1 | SRM1_02207 | SRM1_00943 | Putative diguanylate cyclase AdrA. | Blue-light photoreceptor. | 0.710 |
adrA_1 | pfyP_2 | SRM1_02207 | SRM1_02582 | Putative diguanylate cyclase AdrA. | Blue-light photoreceptor. | 0.897 |
adrA_1 | ydaM_1 | SRM1_02207 | SRM1_00244 | Putative diguanylate cyclase AdrA. | Putative diguanylate cyclase YdaM. | 0.599 |
adrA_1 | yegE | SRM1_02207 | SRM1_04033 | Putative diguanylate cyclase AdrA. | Putative diguanylate cyclase YegE. | 0.980 |
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