STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPH82084.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)    
Predicted Functional Partners:
OPH82085.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.840
OPH82083.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.775
OPH82303.1
Glucose-1-phosphate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
gcvP
Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.697
OPH82950.1
Pyruvate dehydrogenase complex E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
  
  0.696
OPH84562.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.650
OPH82087.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.632
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
   
 
 0.603
OPH82369.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.555
OPH81939.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.555
Your Current Organism:
Nitrobacter vulgaris
NCBI taxonomy Id: 29421
Other names: DSM 10236, N. vulgaris, Nitrobacter vulgaris Bock et al. 2001, strain Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.