STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2M20_14275Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (663 aa)    
Predicted Functional Partners:
OPH83699.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.727
OPH82695.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.671
OPH82018.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.623
OPH84013.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.561
OPH83496.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.561
OPH82997.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.561
OPH82619.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.561
OPH82629.1
Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.561
OPH81768.1
Protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.561
OPH81630.1
Translocase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.561
Your Current Organism:
Nitrobacter vulgaris
NCBI taxonomy Id: 29421
Other names: DSM 10236, N. vulgaris, Nitrobacter vulgaris Bock et al. 2001, strain Z
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.