STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbru_0518Integrase. (163 aa)    
Predicted Functional Partners:
Lbru_0682
Phosphate acetyl/butaryl transferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.678
traG_2
Mating contact stabilization protein TraG.
  
     0.587
Lbru_1389
Conjugative transfer protein TraB.
  
     0.585
comF
Competence protein ComF.
   
    0.563
traE_1
Type IV conjugative transfer system protein TraE.
  
     0.537
traW
Type-F conjugative transfer system protein.
  
  
 0.535
traC
F pilus assembly protein TraC.
  
   
 0.529
traE_2
Type IV conjugative transfer system protein TraE.
  
     0.527
Lbru_2241
Conjugal pilus assembly protein TraF.
  
     0.522
Lbru_3280
Conjugal pilus assembly protein TraF.
  
     0.522
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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