Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Lbru_0807Inner membrane protein/sensory box protein LssE. (1909 aa)    
Predicted Functional Partners:
Lbru_0788
Sensory box histidine kinase/response regulator.
 0.993
Lbru_2116
Sensory box histidine kinase/response regulator.
 0.992
gacS/letS
Transmission sensor LetS.
 0.990
Lbru_1071
GGDEF domain-containing sensory box protein.
 
0.988
Lbru_1695
Sensory histidine-kinase / response regulator.
  
 0.987
Lbru_1180
Sensory box histidine kinase/response regulator.
 
 0.986
Lbru_2389
Sensory box histidine kinase/response regulator.
 0.984
Lbru_0180
Regulatory protein (GGDEF, PAS, PAC domains).
 
0.980
Lbru_0584
Sensory box histidine kinase/response regulator.
 
 0.980
Lbru_1735
GGDEF/EAL domain-containing sensory box protein.
 
0.979
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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