Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
potA_1Spermidine/putrescine transport system ATP-binding protein PotA. (403 aa)    
Predicted Functional Partners:
Lbru_0960
Quaternary amine ABV transporter (QAT), permease/periplasmic amine-binding protein.
 
 0.999
gbuC
Glycine betaine/carnitine transport binding protein GbuC precursor.
 
 0.998
opuCC
Glycine betaine/carnitine/choline-binding protein OpuCC precursor.
 
 
 0.970
Lbru_2743
Amino acid (glutamine) ABC transporter permease.
  
  
 0.515
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.463
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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