STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbru_1024ABC transporter ATP binding protein. (245 aa)    
Predicted Functional Partners:
Lbru_1025
ABC transporter permease.
 
 0.999
Lbru_1023
ABC transport system periplasmic substrate binding protein.
 
 0.997
ttg2B
Toluene tolerance protein Ttg2B.
 
 0.993
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 0.987
Lbru_1423
Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).
  
 0.974
Lbru_1022
Transport protein.
 
 
  0.942
Lbru_1378
Putative ABC transport system permease.
  
 0.916
ttg2D
Toluene tolerance protein Ttg2D.
  
 
 0.892
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
     
  0.836
Lbru_1377
Putative transmembrane protein.
  
 0.828
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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