Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
Lbru_1027Fusaric acid resistance protein family protein. (335 aa)    
Predicted Functional Partners:
Lbru_1026
Hypothetical protein.
       0.870
Lbru_1538
Putative iron-sulpher cluster proteins NifU.
   
    0.645
nifU
Nitrogen fixation protein NifU.
   
    0.645
Lbru_1030
Hypothetical protein.
       0.627
Lbru_1024
ABC transporter ATP binding protein.
       0.624
Lbru_1025
ABC transporter permease.
       0.624
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
       0.587
mvaA
Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family.
       0.583
Lbru_1022
Transport protein.
       0.565
Lbru_1023
ABC transport system periplasmic substrate binding protein.
       0.565
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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