STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iscSCysteine desulfurase NifS. (387 aa)    
Predicted Functional Partners:
Lbru_1538
Putative iron-sulpher cluster proteins NifU.
 
 0.999
nifU
Nitrogen fixation protein NifU.
 
 0.999
sufA
Fe-S cluster assembly protein; Belongs to the HesB/IscA family.
 
  
 0.987
tusA
Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family.
   
 0.987
Lbru_2653
Sulfurylase ThiF.
   
 0.975
Lbru_2194
Rrf2 family transporter protein.
  
 
 0.972
Lbru_0766
Ferredoxin reductase.
  
 0.961
Lbru_3247
Ferredoxin reductase.
  
 0.961
Lbru_1786
Oxidoreductase, FAD-binding protein.
  
 0.954
Lbru_3245
Transcriptional regulator.
  
 
 0.907
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.