STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fimVFimV protein. (555 aa)    
Predicted Functional Partners:
Lbru_0549
Hypothetical protein.
    
   0.808
rpoE
Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.
    
   0.808
rtxA2_1
Structural toxin protein RtxA.
    
 
 0.594
Lbru_1188
Metalloproteinase-like protein.
    
 
 0.594
Lbru_1327
Hypothetical protein.
    
 
 0.594
Lbru_1831
Hypothetical protein.
    
 
 0.594
rtxA2_2
Structural toxin protein RtxA.
    
 
 0.594
Lbru_2688
Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein.
    
 
 0.594
Lbru_2787
Hypothetical protein.
    
 
 0.594
Lbru_1664
Putative thermolabile hemolysin.
       0.515
Your Current Organism:
Legionella brunensis
NCBI taxonomy Id: 29422
Other names: ATCC 43878, CCUG 31114, CIP 103874, DSM 19236, L. brunensis, NCTC 12240, strain 441-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.